RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 RPAINQ86UA6 219 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PROCA1Q8NCQ7 364 aaPredicted RBP6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ATL2Q8NHH9 583 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 FAM71BQ8TC56 605 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TSSK1BQ9BXA7 367 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PDS5AQ29RF7 1337 aaKnown RBP6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PNPLA7Q6ZV29 1317 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 MYO1CO00159 1063 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 LIG4P49917 911 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TFCP2Q12800 502 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ARID5BQ14865 1188 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 DOK7Q18PE1 504 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ASPRV1Q53RT3 343 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 IER5Q5VY09 327 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TTC19Q6DKK2 380 aaPredicted RBP6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 DSTYKQ6XUX3 929 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SV2BQ7L1I2 683 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CCDC50Q8IVM0 306 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CEP63Q96MT8 703 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TSGA10Q9BZW7 698 aa6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 MORC2Q9Y6X9 1032 aaPredicted RBP6.8□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TRIM75PA6NK02 468 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SFI1A8K8P3 1242 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PARNO95453 639 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CFBP00751 764 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 IGFBP4P22692 258 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CCT5P48643 541 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 HDLBPQ00341 1268 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PPFIA1Q13136 1202 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RAB30Q15771 203 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 STXBP2Q15833 593 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 MEI1Q5TIA1 1274 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RCSD1Q6JBY9 416 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 C8orf74Q6P047 294 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ANKRD23Q86SG2 305 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 EGFL6Q8IUX8 553 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 BCAS4Q8TDM0 211 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CSGALNACT1Q8TDX6 532 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 WDR11Q9BZH6 1224 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 YY1AP1Q9H869 796 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 LCMT1Q9UIC8 334 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 UTYO14607 1347 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 A6NNZ2 444 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 POLR2DO15514 142 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RAD17O75943 681 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TMEM191BP0C7N4 346 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PHKA2P46019 1235 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RNASE9P60153 205 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SF3A3Q12874 501 aaKnown RBP eCLIP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 LETM2Q2VYF4 491 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TUBB8Q3ZCM7 444 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SUSD4Q5VX71 490 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ZNF557Q8N988 423 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 AGBL3Q8NEM8 1001 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CCDC110Q8TBZ0 833 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 FAM89AQ96GI7 184 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TM6SF1Q9BZW5 370 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 C2orf40Q9H1Z8 148 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ANAPC5Q9UJX4 755 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 EDARQ9UNE0 448 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 A0A1W2PRG0 241 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 KCNQ3O43525 872 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ALDH1A2O94788 518 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 KRT19P08727 400 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 HARSP12081 509 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 EEF2P13639 858 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 GPSM2P81274 684 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RAD51AP2Q09MP3 1159 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 MKRN3Q13064 507 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 MAP2K5Q13163 448 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PTPN21Q16825 1174 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TRMT1LQ7Z2T5 733 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TMTC1Q8IUR5 882 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ZC3H15Q8WU90 426 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP28Q96RU2 1077 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CAPS2Q9BXY5 557 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 GCOM2Q9BZD3 368 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SRP68Q9UHB9 627 aaKnown RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RIPOR2Q9Y4F9 1068 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 HOXA10P31260 410 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 DMP1Q13316 513 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 WHAMMP3Q1A5X7 153 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 DEFB132Q7Z7B7 95 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 OOSP2Q86WS3 158 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TRIM50Q86XT4 487 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PIAS4Q8N2W9 510 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CABS1Q96KC9 395 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 WRNIP1Q96S55 665 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PSMB7Q99436 277 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 NUP85Q9BW27 656 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ZSWIM6Q9HCJ5 1215 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PCDHB7Q9Y5E2 793 aa6.79□□□□□ -1.32
HLA-DQA1-205ENST00000460633 NKRFO15226 690 aaKnown RBP eCLIP6.78□□□□□ -1.32
HLA-DQA1-205ENST00000460633 XYLBO75191 536 aa6.78□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RALAP11233 206 aa6.78□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ALCAMQ13740 583 aa6.78□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PHKG1Q16816 387 aa6.78□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SLFN13Q68D06 897 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms