RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 FBXO16Q8IX29 292 aaPredicted RBP8.57□□□□□ -1.04
ABCA4-202ENST00000460514 TRIB2Q92519 343 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 TNPO1Q92973 898 aaKnown RBP8.57□□□□□ -1.04
ABCA4-202ENST00000460514 FERMT2Q96AC1 680 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 USP28Q96RU2 1077 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 RIT2Q99578 217 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 TEKT3Q9BXF9 490 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 AGO4Q9HCK5 861 aaKnown RBP8.57□□□□□ -1.04
ABCA4-202ENST00000460514 FLRT1Q9NZU1 646 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 FAM184BQ9ULE4 1060 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 PTCH2Q9Y6C5 1203 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 MCM3APO60318 1980 aa8.57□□□□□ -1.04
ABCA4-202ENST00000460514 NFASCO94856 1347 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 KIAA1217Q5T5P2 1943 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 SPTLC2O15270 562 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 MSH4O15457 936 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 PPP6R2O75170 966 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 IGHA2P01877 340 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 ARP10275 920 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 TXNP10599 105 aaKnown RBP8.56□□□□□ -1.04
ABCA4-202ENST00000460514 ELNP15502 786 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 CAP1Q01518 475 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 KRT76Q01546 638 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 TNFAIP2Q03169 654 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 KCNC4Q03721 635 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 NBR1Q14596 966 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 CCDC144BQ3MJ40 725 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 BRDTQ58F21 947 aaPredicted RBP8.56□□□□□ -1.04
ABCA4-202ENST00000460514 LINC00301Q8NCQ3 95 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 CYP2W1Q8TAV3 490 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 ETNPPLQ8TBG4 499 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 SLC5A5Q92911 643 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 LENG9Q96B70 501 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 MLXIPQ9HAP2 919 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 SPC25Q9HBM1 224 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 KCNMB3Q9NPA1 279 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 TFIP11Q9UBB9 837 aaKnown RBP8.56□□□□□ -1.04
ABCA4-202ENST00000460514 PCDHA12Q9UN75 941 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 Q9Y3F1 56 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 CLIC4Q9Y696 253 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 LRRC37A2A6NM11 1700 aa8.56□□□□□ -1.04
ABCA4-202ENST00000460514 GOLGA6L4A6NEF3 574 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 NOP56O00567 594 aaKnown RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 SEPT4O43236 478 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 EDIL3O43854 480 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 GGPS1O95749 300 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 GH1P01241 217 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 INHAP05111 366 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 ZNF865P0CJ78 1059 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 RARBP10826 455 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 CYBAP13498 195 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 KCNA2P16389 499 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 UBA1P22314 1058 aaKnown RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 CNGA1P29973 690 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 SFNP31947 248 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 TXLNAP40222 546 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 ADCYAP1R1P41586 468 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 TXKP42681 527 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 ME1P48163 572 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 JAK3P52333 1124 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 CACNB2Q08289 660 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 LAMC2Q13753 1193 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 PDIA5Q14554 519 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 PTPAQ15257 358 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 E2F4Q16254 413 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 DUSP28Q4G0W2 176 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 MAP3K21Q5TCX8 1036 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 ZNF746Q6NUN9 644 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 TAPT1Q6NXT6 567 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 CCDC62Q6P9F0 684 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 METTL7BQ6UX53 244 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 CLEC17AQ6ZS10 378 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 DHX37Q8IY37 1157 aaKnown RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 SMAP1Q8IYB5 467 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 RDM1Q8NG50 284 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 ERMNQ8TAM6 284 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 LEO1Q8WVC0 666 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 AK8Q96MA6 479 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 KATNBL1Q9H079 304 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 AP5M1Q9H0R1 490 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 TMEM60Q9H2L4 133 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 JPH1Q9HDC5 661 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 SLC9A2Q9UBY0 812 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 RCOR1Q9UKL0 485 aa8.55□□□□□ -1.04
ABCA4-202ENST00000460514 SRPRBQ9Y5M8 271 aaKnown RBP8.55□□□□□ -1.04
ABCA4-202ENST00000460514 ELP1O95163 1332 aa8.54□□□□□ -1.04
ABCA4-202ENST00000460514 VWA3AA6NCI4 1184 aa8.54□□□□□ -1.04
ABCA4-202ENST00000460514 WDR64B1ANS9 1081 aa8.54□□□□□ -1.04
ABCA4-202ENST00000460514 WNT7AO00755 349 aa8.54□□□□□ -1.04
ABCA4-202ENST00000460514 SLC26A4O43511 780 aa8.54□□□□□ -1.04
ABCA4-202ENST00000460514 ZEB2O60315 1214 aa8.54□□□□□ -1.04
ABCA4-202ENST00000460514 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
ABCA4-202ENST00000460514 CUTAO60888 179 aa8.54□□□□□ -1.04
ABCA4-202ENST00000460514 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms