RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 IL17RAQ96F46 866 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 EHMT1Q9H9B1 1298 aa14.22□□□□□ -0.13
GPNMB-204ENST00000459927 SIP14410 1827 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 GSTTP1A0A1W2PQM5 241 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 SGSM2O43147 1006 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 IL9P15248 144 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 ARHGAP4P98171 946 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 PUS10Q3MIT2 529 aaKnown RBP14.21□□□□□ -0.13
GPNMB-204ENST00000459927 PTCRAQ6ISU1 281 aaPredicted RBP14.21□□□□□ -0.13
GPNMB-204ENST00000459927 TRIM50Q86XT4 487 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 TMTC2Q8N394 836 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 LMBR1Q8WVP7 490 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 SEPT1Q8WYJ6 367 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.13
GPNMB-204ENST00000459927 LZTS2Q9BRK4 669 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 SPZ1Q9BXG8 430 aa14.21□□□□□ -0.13
GPNMB-204ENST00000459927 ZNF215Q9UL58 517 aaPredicted RBP14.21□□□□□ -0.13
GPNMB-204ENST00000459927 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
GPNMB-204ENST00000459927 MYO7AQ13402 2215 aa14.21□□□□□ -0.14
GPNMB-204ENST00000459927 RB1P06400 928 aa14.2□□□□□ -0.14
GPNMB-204ENST00000459927 BMPR1AP36894 532 aa14.2□□□□□ -0.14
GPNMB-204ENST00000459927 SP4Q02446 784 aa14.2□□□□□ -0.14
GPNMB-204ENST00000459927 MB21D2Q8IYB1 491 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-204ENST00000459927 SRBD1Q8N5C6 995 aaKnown RBP14.2□□□□□ -0.14
GPNMB-204ENST00000459927 MTA3Q9BTC8 594 aa14.2□□□□□ -0.14
GPNMB-204ENST00000459927 IFIH1Q9BYX4 1025 aaKnown RBP14.2□□□□□ -0.14
GPNMB-204ENST00000459927 PSTPIP2Q9H939 334 aa14.2□□□□□ -0.14
GPNMB-204ENST00000459927 LY9Q9HBG7 655 aa14.2□□□□□ -0.14
GPNMB-204ENST00000459927 DOCK5Q9H7D0 1870 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 MAFGO15525 162 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 ITGB5P18084 799 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 KIF5BP33176 963 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 TCF7P36402 384 aaPredicted RBP14.19□□□□□ -0.14
GPNMB-204ENST00000459927 GNAQP50148 359 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 COL19A1Q14993 1142 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 TCEAL5Q5H9L2 206 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 RUFY4Q6ZNE9 571 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 ZNF654Q8IZM8 581 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 FIBCD1Q8N539 461 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
GPNMB-204ENST00000459927 GPRASP2Q96D09 838 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 PABPC5Q96DU9 382 aaKnown RBP14.19□□□□□ -0.14
GPNMB-204ENST00000459927 MYL10Q9BUA6 226 aa14.19□□□□□ -0.14
GPNMB-204ENST00000459927 COL4A4P53420 1690 aaPredicted RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 POTEB3A0JP26 581 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 FAM86C2PA6NEL3 165 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 C5orf67F2Z3F1 127 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 H3BQ06 376 aaPredicted RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 DDAH1O94760 285 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 KCNA2P16389 499 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 LTBRP36941 435 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 MGAT3Q09327 533 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 LPIN1Q14693 890 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 TIGD5Q53EQ6 642 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 MARCH8Q5T0T0 291 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 TAF2Q6P1X5 1199 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 POTEBQ6S5H4 581 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 RTN4RL1Q86UN2 441 aaPredicted RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 CMTR1Q8N1G2 835 aaKnown RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 CDHR1Q96JP9 859 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 SMARCAD1Q9H4L7 1026 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 NSUN3Q9H649 340 aaKnown RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 SEC63Q9UGP8 760 aaKnown RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 HCN4Q9Y3Q4 1203 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 RBM8AQ9Y5S9 174 aaKnown RBP14.18□□□□□ -0.14
GPNMB-204ENST00000459927 UBIAD1Q9Y5Z9 338 aa14.18□□□□□ -0.14
GPNMB-204ENST00000459927 MBLAC1A4D2B0 266 aaPredicted RBP14.17□□□□□ -0.14
GPNMB-204ENST00000459927 NCK2O43639 380 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 PLEKHA8P1O95397 391 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 LINC00271P0C7V0 271 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 GHRP10912 638 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 ALADP13716 330 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 SSTR3P32745 418 aaPredicted RBP14.17□□□□□ -0.14
GPNMB-204ENST00000459927 CASC1Q6TDU7 716 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 RSPH3Q86UC2 560 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 DNAJB3Q8WWF6 145 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 ZNF689Q96CS4 500 aaPredicted RBP14.17□□□□□ -0.14
GPNMB-204ENST00000459927 JADE2Q9NQC1 790 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 ERAP1Q9NZ08 941 aa14.17□□□□□ -0.14
GPNMB-204ENST00000459927 PRR33A8MZF0 331 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 GRM6O15303 877 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 PRC1O43663 620 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 DGKIO75912 1065 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 MCM5P33992 734 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 LIFRP42702 1097 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 COL9A3Q14050 684 aaPredicted RBP14.16□□□□□ -0.14
GPNMB-204ENST00000459927 GRIK4Q16099 956 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 CTC1Q2NKJ3 1217 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 FBXO47Q5MNV8 452 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 EP400NLQ6ZTU2 488 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 FANCBQ8NB91 859 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 GLG1Q92896 1179 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 CLP1Q92989 425 aaKnown RBP14.16□□□□□ -0.14
GPNMB-204ENST00000459927 TMEM87BQ96K49 555 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 PCDHA6Q9UN73 950 aa14.16□□□□□ -0.14
GPNMB-204ENST00000459927 PCDHA8Q9Y5H6 950 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms