RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 INF2Q27J81 1249 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 KIAA0753Q2KHM9 967 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 PIK3AP1Q6ZUJ8 805 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 DIS3L2Q8IYB7 885 aaKnown RBP24.67■■□□□ 1.54
SSNA1-202ENST00000459860 C7orf31Q8N865 590 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 OXER1Q8TDS5 423 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 SEPT1Q8WYJ6 367 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 KAT2BQ92831 832 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 NAP1L4Q99733 375 aaKnown RBP24.67■■□□□ 1.54
SSNA1-202ENST00000459860 TBC1D22BQ9NU19 505 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 NOD1Q9Y239 953 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 UNC80Q8N2C7 3258 aa24.67■■□□□ 1.54
SSNA1-202ENST00000459860 H3BRB1 525 aa24.66■■□□□ 1.54
SSNA1-202ENST00000459860 KIAA0355O15063 1070 aa24.66■■□□□ 1.54
SSNA1-202ENST00000459860 RAG1P15918 1043 aa24.66■■□□□ 1.54
SSNA1-202ENST00000459860 TCF7P36402 384 aaPredicted RBP24.66■■□□□ 1.54
SSNA1-202ENST00000459860 EPHB4P54760 987 aa24.66■■□□□ 1.54
SSNA1-202ENST00000459860 ITGB3BPQ13352 177 aaPredicted RBP24.66■■□□□ 1.54
SSNA1-202ENST00000459860 UTP14CQ5TAP6 766 aaKnown RBP24.66■■□□□ 1.54
SSNA1-202ENST00000459860 MOXD1Q6UVY6 613 aa24.66■■□□□ 1.54
SSNA1-202ENST00000459860 NEK8Q86SG6 692 aa24.66■■□□□ 1.54
SSNA1-202ENST00000459860 TUT1Q9H6E5 874 aaKnown RBP24.66■■□□□ 1.54
SSNA1-202ENST00000459860 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.66■■□□□ 1.54
SSNA1-202ENST00000459860 B4GALT4O60513 344 aa24.65■■□□□ 1.54
SSNA1-202ENST00000459860 CD4P01730 458 aa24.65■■□□□ 1.54
SSNA1-202ENST00000459860 GUCY1B3Q02153 619 aa24.65■■□□□ 1.54
SSNA1-202ENST00000459860 NR5A1Q13285 461 aa24.65■■□□□ 1.54
SSNA1-202ENST00000459860 LETM2Q2VYF4 491 aa24.65■■□□□ 1.54
SSNA1-202ENST00000459860 ZNF697Q5TEC3 545 aa24.65■■□□□ 1.54
SSNA1-202ENST00000459860 C16orf70Q9BSU1 422 aa24.65■■□□□ 1.54
SSNA1-202ENST00000459860 DDX39AO00148 427 aaKnown RBP24.64■■□□□ 1.54
SSNA1-202ENST00000459860 HAS3O00219 553 aa24.64■■□□□ 1.54
SSNA1-202ENST00000459860 GCFC2P16383 781 aaKnown RBP24.64■■□□□ 1.54
SSNA1-202ENST00000459860 GNL2Q13823 731 aaKnown RBP24.64■■□□□ 1.54
SSNA1-202ENST00000459860 SESTD1Q86VW0 696 aa24.64■■□□□ 1.54
SSNA1-202ENST00000459860 TRPV6Q9H1D0 765 aa24.64■■□□□ 1.54
SSNA1-202ENST00000459860 SEMA6BQ9H3T3 888 aa24.64■■□□□ 1.54
SSNA1-202ENST00000459860 AZI2Q9H6S1 392 aa24.64■■□□□ 1.54
SSNA1-202ENST00000459860 TBX21Q9UL17 535 aa24.64■■□□□ 1.54
SSNA1-202ENST00000459860 CYP3A7-CYP3A51PA0A087WV96 503 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 BTBD18B2RXH4 712 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 TDP2O95551 362 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 CYP3A7P24462 503 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 ACTR2P61160 394 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 SMAD3P84022 425 aaKnown RBP24.63■■□□□ 1.53
SSNA1-202ENST00000459860 Q4G0T1 1027 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 PPP1R13LQ8WUF5 828 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 GLG1Q92896 1179 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 LENG9Q96B70 501 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 CDX2Q99626 313 aaPredicted RBP24.63■■□□□ 1.53
SSNA1-202ENST00000459860 TRMT13Q9NUP7 481 aaKnown RBP24.63■■□□□ 1.53
SSNA1-202ENST00000459860 DDX25Q9UHL0 483 aaKnown RBP24.63■■□□□ 1.53
SSNA1-202ENST00000459860 SMC3Q9UQE7 1217 aa24.63■■□□□ 1.53
SSNA1-202ENST00000459860 EMSYQ7Z589 1322 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 GSTTP1A0A1W2PQM5 241 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 KRT76Q01546 638 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 TRIM50Q86XT4 487 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 FBXO18Q8NFZ0 1043 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 TTYH1Q9H313 450 aaPredicted RBP24.62■■□□□ 1.53
SSNA1-202ENST00000459860 SMARCAD1Q9H4L7 1026 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 ERAP1Q9NZ08 941 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 HDAC6Q9UBN7 1215 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 GTF2IRD1Q9UHL9 959 aa24.62■■□□□ 1.53
SSNA1-202ENST00000459860 MSH4O15457 936 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 CCNT1O60563 726 aaKnown RBP24.61■■□□□ 1.53
SSNA1-202ENST00000459860 PTGISQ16647 500 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 TNFRSF25Q93038 417 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 UIMC1Q96RL1 719 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 TEKT3Q9BXF9 490 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 HIPK3Q9H422 1215 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 TELO2Q9Y4R8 837 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 KAT6AQ92794 2004 aa24.61■■□□□ 1.53
SSNA1-202ENST00000459860 GAS7O60861 476 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 TIMP1P01033 207 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 GJB2P29033 226 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 PPP4R3AQ6IN85 833 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 ZNF746Q6NUN9 644 aaPredicted RBP24.6■■□□□ 1.53
SSNA1-202ENST00000459860 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.6■■□□□ 1.53
SSNA1-202ENST00000459860 SMAP1Q8IYB5 467 aaPredicted RBP24.6■■□□□ 1.53
SSNA1-202ENST00000459860 CCDC155Q8N6L0 562 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 MBOAT7Q96N66 472 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 RIT2Q99578 217 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 PPP1R12CQ9BZL4 782 aa24.6■■□□□ 1.53
SSNA1-202ENST00000459860 BACH1O14867 736 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 DHX15O43143 795 aaKnown RBP24.59■■□□□ 1.53
SSNA1-202ENST00000459860 EDIL3O43854 480 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 MARCH6O60337 910 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 GNAT1P11488 350 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 LRCH2Q5VUJ6 765 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 FAM160B1Q5W0V3 765 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 GDF6Q6KF10 455 aaPredicted RBP24.59■■□□□ 1.53
SSNA1-202ENST00000459860 MIS18BP1Q6P0N0 1132 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 SLC5A5Q92911 643 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 TNPO1Q92973 898 aaKnown RBP24.59■■□□□ 1.53
SSNA1-202ENST00000459860 FOXP1Q9H334 677 aaPredicted RBP24.59■■□□□ 1.53
SSNA1-202ENST00000459860 SAMM50Q9Y512 469 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 EYSQ5T1H1 3165 aa24.59■■□□□ 1.53
SSNA1-202ENST00000459860 C17orf102A2RUQ5 167 aa24.58■■□□□ 1.53
SSNA1-202ENST00000459860 FAM205CA6NFA0 338 aa24.58■■□□□ 1.53
SSNA1-202ENST00000459860 LGR5O75473 907 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms