RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MOXD1Q6UVY6 613 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 GET4Q7L5D6 327 aaPredicted RBP11.59□□□□□ -0.55
USP39-210ENST00000459775 FBXO16Q8IX29 292 aaPredicted RBP11.59□□□□□ -0.55
USP39-210ENST00000459775 SAMD3Q8N6K7 520 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 AGO4Q9HCK5 861 aaKnown RBP11.59□□□□□ -0.55
USP39-210ENST00000459775 FLRT1Q9NZU1 646 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 VAV3Q9UKW4 847 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 HPSEQ9Y251 543 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 FRMD4BQ9Y2L6 1034 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 ZSWIM8A7E2V4 1837 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
USP39-210ENST00000459775 PSMD10O75832 226 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 ZNF202O95125 648 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 CASP1P29466 404 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 MAPK4P31152 587 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 PRPHP41219 470 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 FAM160A1Q05DH4 1040 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 PDE4DQ08499 809 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 STXBP2Q15833 593 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 LRCH2Q5VUJ6 765 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 NCAPH2Q6IBW4 605 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 CCDC73Q6ZRK6 1079 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 IGSF22Q8N9C0 903 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 SLC5A5Q92911 643 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 DHX58Q96C10 678 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 LRWD1Q9UFC0 647 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 GABRQQ9UN88 632 aa11.59□□□□□ -0.55
USP39-210ENST00000459775 BRCA2P51587 3418 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 LAD1O00515 517 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 CREB3O43889 395 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 ARIH2O95376 493 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 EDNRBP24530 442 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 COPB2P35606 906 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 SYKP43405 635 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 PSMC4P43686 418 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 SATB1Q01826 763 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 CYP4A11Q02928 519 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 MORN1Q5T089 497 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 GJC2Q5T442 439 aaPredicted RBP11.58□□□□□ -0.56
USP39-210ENST00000459775 TRMT1LQ7Z2T5 733 aaKnown RBP11.58□□□□□ -0.56
USP39-210ENST00000459775 CKAP2LQ8IYA6 745 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
USP39-210ENST00000459775 DNERQ8NFT8 737 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 INPP4AQ96PE3 977 aaPredicted RBP11.58□□□□□ -0.56
USP39-210ENST00000459775 UNC45AQ9H3U1 944 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 RGL1Q9NZL6 768 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 SERTAD1Q9UHV2 236 aa11.58□□□□□ -0.56
USP39-210ENST00000459775 TNPO2O14787 897 aaKnown RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 STRNO43815 780 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 GAS7O60861 476 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 KIF4AO95239 1232 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 MBD3O95983 291 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 LONP1P36776 959 aaKnown RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
USP39-210ENST00000459775 LY6KQ17RY6 165 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 ARMCX2Q7L311 632 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 KCNK18Q7Z418 384 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 COPS5Q92905 334 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 MAML3Q96JK9 1138 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 ADD3Q9UEY8 706 aaKnown RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 GJD2Q9UKL4 321 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 ZBTB39O15060 712 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 EIF3JO75822 258 aaKnown RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 SNAI1O95863 264 aaPredicted RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 CCNE2O96020 404 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 UBA7P41226 1012 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 SP3Q02447 781 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 DHX8Q14562 1220 aaKnown RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 CABP7Q86V35 215 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 ZNF333Q96JL9 665 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 PNMA5Q96PV4 448 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 IWS1Q96ST2 819 aa11.57□□□□□ -0.56
USP39-210ENST00000459775 NAP1L4Q99733 375 aaKnown RBP11.57□□□□□ -0.56
USP39-210ENST00000459775 SYCE3A1L190 88 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 SLC15A5A6NIM6 579 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 MED24O75448 989 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 KCNA2P16389 499 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 CYP2C19P33261 490 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 AFMP43652 599 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 GRB10Q13322 594 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 ORC2Q13416 577 aaPredicted RBP11.56□□□□□ -0.56
USP39-210ENST00000459775 TMEM266Q2M3C6 531 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 SKOR2Q2VWA4 1001 aaPredicted RBP11.56□□□□□ -0.56
USP39-210ENST00000459775 ZSCAN23Q3MJ62 389 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 NAALADL2Q58DX5 795 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 SLFN12Q8IYM2 578 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 RASSF8Q8NHQ8 419 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 SNX29Q8TEQ0 813 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 DRC1Q96MC2 740 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 FAM20AQ96MK3 541 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 MAF1Q9H063 256 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 WRAP73Q9P2S5 460 aaPredicted RBP11.56□□□□□ -0.56
USP39-210ENST00000459775 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
USP39-210ENST00000459775 FAM237AA0A1B0GTK4 181 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
USP39-210ENST00000459775 SPATA31C2B4DYI2 1134 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms