RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 PKN1Q16512 942 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SMRP1Q8NCR6 262 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 BCAS3Q9H6U6 928 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SETD4Q9NVD3 440 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CLEC1BQ9P126 229 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MRPL11Q9Y3B7 192 aaKnown RBP13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 NEDD4P46934 1319 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MYH7BA7E2Y1 1941 aa13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 HIP1O00291 1037 aa13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 HSD17B4P51659 736 aa13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 BARX2Q9UMQ3 279 aaPredicted RBP13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ZDBF2Q9HCK1 2354 aa13.09□□□□□ -0.31
PRAMEF35P-201ENST00000458709 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 GLP2RO95838 553 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 GHRP10912 638 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 DNAJB1P25685 340 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 SIGLEC14Q08ET2 396 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 BTG3Q14201 252 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PGM5Q15124 567 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 FAM26DQ5JW98 314 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ZNF589Q86UQ0 364 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ASIC4Q96FT7 647 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 JMJD4Q9H9V9 463 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 VAT1LQ9HCJ6 419 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PLAGL2Q9UPG8 496 aa13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 USP15Q9Y4E8 981 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF35P-201ENST00000458709 EPB41L2O43491 1005 aaKnown RBP13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CHRNA1P02708 482 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ITGB1P05556 798 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 AVPR2P30518 371 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ADAM17P78536 824 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 FOXK2Q01167 660 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 GHRHRQ02643 423 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 COASYQ13057 564 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 VSIG10LQ86VR7 867 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 DGKHQ86XP1 1220 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 EFHBQ8N7U6 833 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 LMBR1Q8WVP7 490 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ZNF689Q96CS4 500 aaPredicted RBP13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 RPGRIP1Q96KN7 1286 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PLVAPQ9BX97 442 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 TELO2Q9Y4R8 837 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PCDHGC5Q9Y5F6 944 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 MRPL42Q9Y6G3 142 aaKnown RBP13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
PRAMEF35P-201ENST00000458709 H0Y858 1186 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 NOP56O00567 594 aaKnown RBP13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PPP1R11O60927 126 aaPredicted RBP13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PDGFBP01127 241 aaPredicted RBP13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 TGFB3P10600 412 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 NRIP1P48552 1158 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ARHGAP4P98171 946 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 LPIN1Q14693 890 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 RUFY4Q6ZNE9 571 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 STOX1Q6ZVD7 989 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 RBM23Q86U06 439 aaKnown RBP13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 SPPL3Q8TCT6 385 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ESR2Q92731 530 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 P2RX5Q93086 422 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PHF7Q9BWX1 381 aaPredicted RBP13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 TLR9Q9NR96 1032 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ZFHX2Q9C0A1 2572 aaPredicted RBP13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PLXNA3P51805 1871 aa13.06□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ENPP3O14638 875 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 DGKIO75912 1065 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 GNAT1P11488 350 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PCP11498 1178 aaKnown RBP13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CHMLP26374 656 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 RBM10P98175 930 aaKnown RBP13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 ASCL5Q7RTU5 278 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 KLHL23Q8NBE8 558 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 LINC01599Q8WXQ3 324 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 AMNQ9BXJ7 453 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 KAT14Q9H8E8 782 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 EHMT1Q9H9B1 1298 aa13.05□□□□□ -0.32
PRAMEF35P-201ENST00000458709 KDM4AO75164 1064 aa13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
PRAMEF35P-201ENST00000458709 CCND2P30279 289 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms