RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
CD28-203ENST00000458610 PPP1R12CQ9BZL4 782 aa18.32■□□□□ 0.52
CD28-203ENST00000458610 CEP290O15078 2479 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 CYP3A7-CYP3A51PA0A087WV96 503 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 GCFC2P16383 781 aaKnown RBP18.31■□□□□ 0.52
CD28-203ENST00000458610 CYP3A7P24462 503 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 ACTR2P61160 394 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 KRT76Q01546 638 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 ITGB3BPQ13352 177 aaPredicted RBP18.31■□□□□ 0.52
CD28-203ENST00000458610 Q4G0T1 1027 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 GDF6Q6KF10 455 aaPredicted RBP18.31■□□□□ 0.52
CD28-203ENST00000458610 MIS18BP1Q6P0N0 1132 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 NEK8Q86SG6 692 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 CAGE1Q8TC20 777 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 C8orf76Q96K31 380 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 RIT2Q99578 217 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 SCN10AQ9Y5Y9 1956 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 MYH7BA7E2Y1 1941 aa18.31■□□□□ 0.52
CD28-203ENST00000458610 PITPNM1O00562 1244 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 LGR5O75473 907 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 ATG7O95352 703 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 MMP1P03956 469 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 CYP2C9P11712 490 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 ITGB8P26012 769 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 SLC26A2P50443 739 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 PTK7Q13308 1070 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 INF2Q27J81 1249 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 FAM160B1Q5W0V3 765 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 KRT40Q6A162 431 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 ZNF746Q6NUN9 644 aaPredicted RBP18.3■□□□□ 0.52
CD28-203ENST00000458610 PLPPR4Q7Z2D5 763 aa18.3■□□□□ 0.52
CD28-203ENST00000458610 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
CD28-203ENST00000458610 MKI67P46013 3256 aaKnown RBP18.3■□□□□ 0.52
CD28-203ENST00000458610 EMSYQ7Z589 1322 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 NRCAMQ92823 1304 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 DDX39AO00148 427 aaKnown RBP18.29■□□□□ 0.52
CD28-203ENST00000458610 DHX15O43143 795 aaKnown RBP18.29■□□□□ 0.52
CD28-203ENST00000458610 PARNO95453 639 aaKnown RBP18.29■□□□□ 0.52
CD28-203ENST00000458610 SMIM10L2AP0DMW4 78 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 SMIM10L2BP0DMW5 78 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 CYP2C18P33260 490 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 RFC2P35250 354 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 STAT5BP51692 787 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 LETM2Q2VYF4 491 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 PPP4R3AQ6IN85 833 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 GJB4Q9NTQ9 266 aa18.29■□□□□ 0.52
CD28-203ENST00000458610 BACH1O14867 736 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 MSH4O15457 936 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 MARCH6O60337 910 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 GAS7O60861 476 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 PSAPP07602 524 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
CD28-203ENST00000458610 AFAP1L1Q8TED9 768 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 LENG9Q96B70 501 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 TMX3Q96JJ7 454 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 MBOAT7Q96N66 472 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 TEKT3Q9BXF9 490 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 RNPEPQ9H4A4 650 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 IL23AQ9NPF7 189 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 DDX25Q9UHL0 483 aaKnown RBP18.28■□□□□ 0.52
CD28-203ENST00000458610 PCDHA10Q9Y5I2 948 aa18.28■□□□□ 0.52
CD28-203ENST00000458610 RRN3P2A6NIE6 340 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 DTNBO60941 627 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 PFKMP08237 780 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 CSF2RAP15509 400 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 SFNP31947 248 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 CCL23P55773 120 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 LRCH2Q5VUJ6 765 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 PSRC1Q6PGN9 363 aaPredicted RBP18.27■□□□□ 0.52
CD28-203ENST00000458610 ABHD15Q6UXT9 468 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 TRIM50Q86XT4 487 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 OXER1Q8TDS5 423 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 SLC5A5Q92911 643 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 FAM20AQ96MK3 541 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 MTIF3Q9H2K0 278 aaKnown RBP18.27■□□□□ 0.52
CD28-203ENST00000458610 SAMM50Q9Y512 469 aa18.27■□□□□ 0.52
CD28-203ENST00000458610 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.27■□□□□ 0.52
CD28-203ENST00000458610 WDR64B1ANS9 1081 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 BTBD18B2RXH4 712 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 EDIL3O43854 480 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 CCNT1O60563 726 aaKnown RBP18.26■□□□□ 0.51
CD28-203ENST00000458610 BAG4O95429 457 aaKnown RBP18.26■□□□□ 0.51
CD28-203ENST00000458610 TDP2O95551 362 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 CCNE2O96020 404 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 RPLP2P05387 115 aaKnown RBP18.26■□□□□ 0.51
CD28-203ENST00000458610 JAK3P52333 1124 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 RBL2Q08999 1139 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 PPFIA1Q13136 1202 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 NR5A1Q13285 461 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 GNL2Q13823 731 aaKnown RBP18.26■□□□□ 0.51
CD28-203ENST00000458610 LRIT3Q3SXY7 679 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 SERINC5Q86VE9 423 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 FBXO18Q8NFZ0 1043 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 RDM1Q8NG50 284 aa18.26■□□□□ 0.51
CD28-203ENST00000458610 ZNF302Q9NR11 478 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms