RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KIAA0753Q2KHM9 967 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 PPP4R3AQ6IN85 833 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 TRIM59Q8IWR1 403 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 CASKIN2Q8WXE0 1202 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
SCFD1-203ENST00000458591 KCTD10Q9H3F6 313 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 EMILIN3Q9NT22 766 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 CDK5RAP2Q96SN8 1893 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 GRIN2DO15399 1336 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 SHOX2O60902 331 aaPredicted RBP15.57■□□□□ 0.08
SCFD1-203ENST00000458591 TTLL1O95922 423 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 ATP2B4P23634 1241 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 MAGEA9P43362 315 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 NFIAQ12857 509 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 PDCLQ13371 301 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 DOK7Q18PE1 504 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 C15orf52Q6ZUT6 534 aaKnown RBP15.57■□□□□ 0.08
SCFD1-203ENST00000458591 CUL5Q93034 780 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 SH3GL2Q99962 352 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 USP40Q9NVE5 1235 aa15.57■□□□□ 0.08
SCFD1-203ENST00000458591 AJAP1Q9UKB5 411 aaPredicted RBP15.57■□□□□ 0.08
SCFD1-203ENST00000458591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.56■□□□□ 0.08
SCFD1-203ENST00000458591 GRID2IPA4D2P6 1211 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 PLCG2P16885 1265 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 EPHB4P54760 987 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 KLHL30Q0D2K2 578 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 KCNH2Q12809 1159 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 NAB2Q15742 525 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 CFAP221Q4G0U5 840 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 GJB7Q6PEY0 223 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
SCFD1-203ENST00000458591 CAPS2Q9BXY5 557 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 ABCB11O95342 1321 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 RBAK-RBAKDNI3L0D1 243 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 SERPINB2P05120 415 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 NT5C2P49902 561 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 PTK2Q05397 1052 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 ITIH3Q06033 890 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 ORC2Q13416 577 aaPredicted RBP15.56■□□□□ 0.08
SCFD1-203ENST00000458591 PIK3R5Q8WYR1 880 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 IQCDQ96DY2 449 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 GANQ9H2C0 597 aa15.56■□□□□ 0.08
SCFD1-203ENST00000458591 ZNF233A6NK53 670 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 RSPH10B2B2RC85 870 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 ZBTB5O15062 677 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 KRT18P05783 430 aaKnown RBP15.55■□□□□ 0.08
SCFD1-203ENST00000458591 RSPH10BP0C881 870 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 POLD1P28340 1107 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 HOXD13P35453 343 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 CORO7P57737 925 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 KCNA1Q09470 495 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 PABPC4Q13310 644 aaKnown RBP eCLIP15.55■□□□□ 0.083e-10■■■□□ 16.3
SCFD1-203ENST00000458591 SLC18A3Q16572 532 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 QRICH1Q2TAL8 776 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 MEI1Q5TIA1 1274 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 ZNF571Q7Z3V5 609 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-203ENST00000458591 DDX42Q86XP3 938 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCFD1-203ENST00000458591 BCAS4Q8TDM0 211 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 KCNQ5Q9NR82 932 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-203ENST00000458591 SFI1A8K8P3 1242 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 RGL2O15211 777 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 RAD51CO43502 376 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 MYBP10242 640 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 PPFIA1Q13136 1202 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 PROM2Q8N271 834 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 GDF3Q9NR23 364 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 BMP2KQ9NSY1 1161 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-203ENST00000458591 SERPINB13Q9UIV8 391 aa15.55■□□□□ 0.08
SCFD1-203ENST00000458591 HSF2BPO75031 334 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 NR2F2P24468 414 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 MRPL12P52815 198 aaKnown RBP15.54■□□□□ 0.08
SCFD1-203ENST00000458591 TCP10Q12799 353 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 ASIC2Q16515 512 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 DPY19L2P1Q6NXN4 242 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 CATSPER3Q86XQ3 398 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 CCDC65Q8IXS2 484 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 RBM46Q8TBY0 533 aaKnown RBP15.54■□□□□ 0.08
SCFD1-203ENST00000458591 PPM1EQ8WY54 764 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 hCG_1984214I3L0E3 225 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 KCNK3O14649 394 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 CLIC2O15247 247 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 GYS1P13807 737 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 CASP4P49662 377 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 SLC12A3P55017 1021 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 CYP4A11Q02928 519 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 NNTQ13423 1086 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 TTC31Q49AM3 519 aaPredicted RBP15.54■□□□□ 0.08
SCFD1-203ENST00000458591 PRR16Q569H4 304 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 EMBQ6PCB8 327 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 RNF10Q8N5U6 811 aaKnown RBP15.54■□□□□ 0.08
SCFD1-203ENST00000458591 ZNF713Q8N859 430 aaPredicted RBP15.54■□□□□ 0.08
SCFD1-203ENST00000458591 CYP2W1Q8TAV3 490 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 CAVIN3Q969G5 261 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 INPP4AQ96PE3 977 aaPredicted RBP15.54■□□□□ 0.08
SCFD1-203ENST00000458591 AP1M1Q9BXS5 423 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 FAM107BQ9H098 131 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 HDAC9Q9UKV0 1011 aa15.54■□□□□ 0.08
SCFD1-203ENST00000458591 PCDHA1Q9Y5I3 950 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms