RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 ELF1P32519 619 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 SF3A3Q12874 501 aaKnown RBP eCLIP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 SHROOM1Q2M3G4 852 aaPredicted RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 VWA3BQ502W6 1294 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 FIGNQ5HY92 759 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 CABP7Q86V35 215 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 TTLL6Q8N841 843 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 CNKSR1Q969H4 720 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 TRIM9Q9C026 710 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 HMGB1P1B2RPK0 211 aaPredicted RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 GCOM1H8Y6P7 765 aaPredicted RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 MYZAPP0CAP1 466 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 TNFRSF8P28908 595 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 ITGB3BPQ13352 177 aaPredicted RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 UBA5Q9GZZ9 404 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 TIAM2Q8IVF5 1701 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 TEKT1Q969V4 418 aa10.89□□□□□ -0.67
ITGA6-207ENST00000458358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 A1CFQ9NQ94 594 aaKnown RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 ARPP21Q9UBL0 812 aaPredicted RBP10.89□□□□□ -0.67
ITGA6-207ENST00000458358 FRMPD2Q68DX3 1309 aaPredicted RBP10.88□□□□□ -0.67
ITGA6-207ENST00000458358 FRMD3A2A2Y4 597 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 RAD51CO43502 376 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 SNCBQ16143 134 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 C12orf60Q5U649 245 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 USP17L2Q6R6M4 530 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 CCDC84Q86UT8 332 aaPredicted RBP10.88□□□□□ -0.67
ITGA6-207ENST00000458358 ARFGAP2Q8N6H7 521 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 SEMA6BQ9H3T3 888 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 HAUS2Q9NVX0 235 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 SIK3Q9Y2K2 1263 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 SBF2Q86WG5 1849 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 FLT1P17948 1338 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 RASSF9O75901 435 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 MYL1P05976 194 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 IL1R1P14778 569 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 HNRNPH3P31942 346 aaKnown RBP10.88□□□□□ -0.67
ITGA6-207ENST00000458358 CTNNA1P35221 906 aaKnown RBP10.88□□□□□ -0.67
ITGA6-207ENST00000458358 CDK8P49336 464 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 SPRED3Q2MJR0 410 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 HEATR3Q7Z4Q2 680 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 DDX42Q86XP3 938 aaKnown RBP eCLIP10.88□□□□□ -0.67
ITGA6-207ENST00000458358 WHAMMQ8TF30 809 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 TBC1D22AQ8WUA7 517 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 ANAPC4Q9UJX5 808 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 PCDHA4Q9UN74 947 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 GJA3Q9Y6H8 435 aa10.88□□□□□ -0.67
ITGA6-207ENST00000458358 GMNCA6NCL1 334 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 CRKP46108 304 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 LETM2Q2VYF4 491 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 CYB5D1Q6P9G0 228 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 PARP9Q8IXQ6 854 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 KIAA0895Q8NCT3 520 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 CCSER1Q9C0I3 900 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 DDX20Q9UHI6 824 aaKnown RBP10.87□□□□□ -0.67
ITGA6-207ENST00000458358 TSKSQ9UJT2 592 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 KIF1CO43896 1103 aaKnown RBP10.87□□□□□ -0.67
ITGA6-207ENST00000458358 GDF11O95390 407 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 KLRC1P26715 233 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 IKQ13123 557 aaPredicted RBP10.87□□□□□ -0.67
ITGA6-207ENST00000458358 QPCTQ16769 361 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 PREPLQ4J6C6 727 aaPredicted RBP10.87□□□□□ -0.67
ITGA6-207ENST00000458358 CNNM4Q6P4Q7 775 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 UBLCP1Q8WVY7 318 aaPredicted RBP10.87□□□□□ -0.67
ITGA6-207ENST00000458358 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 GPCPD1Q9NPB8 672 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 MCM8Q9UJA3 840 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 DNM1LO00429 736 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 RGL2O15211 777 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 POLD1P28340 1107 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 KIF5BP33176 963 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 TECP42680 631 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 TNNC1P63316 161 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 ZYXQ15942 572 aaKnown RBP10.87□□□□□ -0.67
ITGA6-207ENST00000458358 MAN2A1Q16706 1144 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 SLF2Q8IX21 1173 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 GOLPH3Q9H4A6 298 aa10.87□□□□□ -0.67
ITGA6-207ENST00000458358 KCNK3O14649 394 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 EZRP15311 586 aaKnown RBP10.86□□□□□ -0.67
ITGA6-207ENST00000458358 HSD17B3P37058 310 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 CDC37Q16543 378 aaPredicted RBP10.86□□□□□ -0.67
ITGA6-207ENST00000458358 KIAA0753Q2KHM9 967 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 SLC9C1Q4G0N8 1177 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 PPP4R3AQ6IN85 833 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 CDC42EP5Q6NZY7 148 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 MIGA2Q7L4E1 593 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 CPLX4Q7Z7G2 160 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 RPAINQ86UA6 219 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 CD302Q8IX05 232 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 KIRREL3Q8IZU9 778 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 FUKQ8N0W3 1084 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 MREGQ8N565 214 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 RNF10Q8N5U6 811 aaKnown RBP10.86□□□□□ -0.67
ITGA6-207ENST00000458358 TBC1D5Q92609 795 aa10.86□□□□□ -0.67
ITGA6-207ENST00000458358 TAF4BQ92750 862 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms