RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 STAM2O75886 525 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 FAM107AO95990 144 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 RPSAP08865 295 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 RPL17P18621 184 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 POLR2EP19388 210 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 KRT9P35527 623 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 GNGT1P63211 74 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 CBX3Q13185 183 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 SPECC1Q5M775 1068 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 AKNAD1Q5T1N1 836 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 CREB3L3Q68CJ9 461 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 ATL3Q6DD88 541 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 ATF7IPQ6VMQ6 1270 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 NCCRP1Q6ZVX7 275 aaPredicted RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 TMC6Q7Z403 805 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 KSR1Q8IVT5 923 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 FAM186BQ8IYM0 893 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 IGSF22Q8N9C0 903 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 STKLD1Q8NE28 680 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 CAGE1Q8TC20 777 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 COG1Q8WTW3 980 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 CTNNBL1Q8WYA6 563 aaPredicted RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 SH3GL2Q99962 352 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 NAA15Q9BXJ9 866 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 SRCIN1Q9C0H9 1055 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 MRPL46Q9H2W6 279 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 PARVBQ9HBI1 364 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 METTL14Q9HCE5 456 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 C11orf16Q9NQ32 467 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 SH2B1Q9NRF2 756 aaPredicted RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 GALNT8Q9NY28 637 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 AATFQ9NY61 560 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 C6orf203Q9P0P8 240 aaPredicted RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 SEPT10Q9P0V9 454 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 CTTNBP2NLQ9P2B4 639 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 G3BP2Q9UN86 482 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 ITM2BQ9Y287 266 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 ASB3Q9Y575 518 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 BZW2Q9Y6E2 419 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 NPATQ14207 1427 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ADGRL3Q9HAR2 1447 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ARHGAP5Q13017 1502 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 SAMD9LQ8IVG5 1584 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ST20-MTHFSA0A0A6YYL1 179 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 PRRG2O14669 202 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 STX10O60499 249 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 MMP20O60882 483 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CUTAO60888 179 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 MBD4O95243 580 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 PARNO95453 639 aaKnown RBP6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ANP32DO95626 131 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ATP6V1G2O95670 118 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 BAG3O95817 575 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 MMEP08473 750 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 GBP1P32455 592 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 GNAQP50148 359 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 GNG11P61952 73 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 SULT2A1Q06520 285 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CKAP4Q07065 602 aaKnown RBP6.16□□□□□ -1.42
HMGB4-202ENST00000458277 NDUFA5Q16718 116 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC144BQ3MJ40 725 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ALDH1L2Q3SY69 923 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 GNPTABQ3T906 1256 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CFAP100Q494V2 611 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 PABPC1LQ4VXU2 614 aaKnown RBP6.16□□□□□ -1.42
HMGB4-202ENST00000458277 NUTM2GQ5VZR2 741 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 PPP4R3AQ6IN85 833 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 LILRA6Q6PI73 481 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 TRIM65Q6PJ69 517 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 UBE3BQ7Z3V4 1068 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 PHLDB2Q86SQ0 1253 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC144CPQ8IYA2 1237 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 SYCP3Q8IZU3 236 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 TTC39CQ8N584 583 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ANKRD44Q8N8A2 993 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 AGBL5Q8NDL9 886 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 VPS37AQ8NEZ2 397 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 FOXD4L4Q8WXT5 416 aaPredicted RBP6.16□□□□□ -1.42
HMGB4-202ENST00000458277 SLC35B4Q969S0 331 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 MPP4Q96JB8 637 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 FGD4Q96M96 766 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CATSPER2Q96P56 530 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 LNPKQ9C0E8 428 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 DCTPP1Q9H773 170 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 NOD2Q9HC29 1040 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ABCB6Q9NP58 842 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 HELLSQ9NRZ9 838 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 NDUFA13Q9P0J0 144 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CEP131Q9UPN4 1083 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 COMMD10Q9Y6G5 202 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 NCANO14594 1321 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 ABCC11Q96J66 1382 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 CDC42BPAQ5VT25 1732 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 DAPK1P53355 1430 aa6.16□□□□□ -1.42
HMGB4-202ENST00000458277 FANCAO15360 1455 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 NEO1Q92859 1461 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 ABCC1P33527 1531 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 ARHGEF5Q12774 1597 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms