RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 METTL7BQ6UX53 244 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 TMTC3Q6ZXV5 915 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 FBXO22Q8NEZ5 403 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 RAD9AQ99638 391 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 C16orf70Q9BSU1 422 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 TUT1Q9H6E5 874 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 ZNF215Q9UL58 517 aaPredicted RBP18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 NAP1L2Q9ULW6 460 aaPredicted RBP18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 SPATA31C2B4DYI2 1134 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 THPOP40225 353 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 FGD1P98174 961 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 RBL2Q08999 1139 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 UBE2SQ16763 222 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 SGMS1Q86VZ5 419 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 ATP6V0A1Q93050 837 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 WNT8BQ93098 351 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 TCEANC2Q96MN5 208 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 BCAS3Q9H6U6 928 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 LMCD1Q9NZU5 365 aa18.08■□□□□ 0.48
CHCHD3-204ENST00000457942 KAT6AQ92794 2004 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 SMIM10L2AP0DMW4 78 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 SMIM10L2BP0DMW5 78 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 SEMA3FQ13275 785 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 RTN1Q16799 776 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 ZNF618Q5T7W0 954 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 EHMT1Q9H9B1 1298 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 RBM28Q9NW13 759 aaKnown RBP18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 PKD2L1Q9P0L9 805 aa18.07■□□□□ 0.48
CHCHD3-204ENST00000457942 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 ZBTB43O43298 467 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 CSPG5O95196 566 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 KRT32Q14532 448 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 APOA5Q6Q788 366 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 TRIM50Q86XT4 487 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 MYOCDQ8IZQ8 938 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 GIMAP8Q8ND71 665 aaPredicted RBP18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 CDHR1Q96JP9 859 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 GPR20Q99678 358 aa18.06■□□□□ 0.48
CHCHD3-204ENST00000457942 EMSYQ7Z589 1322 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 CNTNAP5Q8WYK1 1306 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 GOLGA8AA7E2F4 631 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 GOLGA8BA8MQT2 603 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 CXCL10P02778 98 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 RSPH10BP0C881 870 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 GNAT1P11488 350 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 NAPAP54920 295 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 NHLH1Q02575 133 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 IKBKEQ14164 716 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 HIC1Q14526 733 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 MBTPS1Q14703 1052 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 TRIM71Q2Q1W2 868 aaKnown RBP18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 DHX32Q7L7V1 743 aaKnown RBP18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 SERINC5Q86VE9 423 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 SENP7Q9BQF6 1050 aa18.05■□□□□ 0.48
CHCHD3-204ENST00000457942 KLF18A0A0U1RQI7 1052 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 ABHD14A-ACY1A0A1B0GW23 586 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 GRXCR2A6NFK2 248 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 TREHO43280 583 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 EFCAB14O75071 495 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 LGR5O75473 907 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 CTSHP09668 335 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 MTMR1Q13613 665 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 FBXL18Q96ME1 805 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 RNPEPQ9H4A4 650 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 SETD4Q9NVD3 440 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 PCDHA6Q9UN73 950 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 PCDHA8Q9Y5H6 950 aa18.04■□□□□ 0.48
CHCHD3-204ENST00000457942 C5orf42Q9H799 3197 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 DCXO43602 365 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 ALADP13716 330 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 TCF7P36402 384 aaPredicted RBP18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 ARHGAP4P98171 946 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 CLUL1Q15846 466 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 ADCK5Q3MIX3 580 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 WWC2Q6AWC2 1192 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 RASEFQ8IZ41 740 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 MICAL3Q7RTP6 2002 aa18.03■□□□□ 0.48
CHCHD3-204ENST00000457942 HMGB1P09429 215 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 ADCY7P51828 1080 aa18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 EXOSC10Q01780 885 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 TCEAL5Q5H9L2 206 aa18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 PPP1R18Q6NYC8 613 aa18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 TRAF7Q6Q0C0 670 aa18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 MRPL38Q96DV4 380 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 BRPF3Q9ULD4 1205 aa18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 TELO2Q9Y4R8 837 aa18.02■□□□□ 0.48
CHCHD3-204ENST00000457942 ATP9AO75110 1047 aa18.01■□□□□ 0.47
CHCHD3-204ENST00000457942 UPP2O95045 317 aa18.01■□□□□ 0.47
CHCHD3-204ENST00000457942 AMHP03971 560 aa18.01■□□□□ 0.47
CHCHD3-204ENST00000457942 KCNA2P16389 499 aa18.01■□□□□ 0.47
CHCHD3-204ENST00000457942 ITGB5P18084 799 aa18.01■□□□□ 0.47
CHCHD3-204ENST00000457942 MARK3P27448 753 aa18.01■□□□□ 0.47
CHCHD3-204ENST00000457942 EPC2Q52LR7 807 aa18.01■□□□□ 0.47
CHCHD3-204ENST00000457942 DBF4BQ8NFT6 615 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms