RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 RSRC2Q7L4I2 434 aaKnown RBP12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 ZBTB33Q86T24 672 aa12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 FMR1NBQ8N0W7 255 aaPredicted RBP12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 PPP4R1Q8TF05 950 aa12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 FAM114A2Q9NRY5 505 aa12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 INTS9Q9NV88 658 aaKnown RBP12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 TXNDC9O14530 226 aa12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 EPHB4P54760 987 aa12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 PEX3P56589 373 aa12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 TRIM28Q13263 835 aaKnown RBP12.72□□□□□ -0.37
SMARCAD1-204ENST00000457823 TRIM49BA6NDI0 452 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 MFAP3LO75121 409 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 SRGAP2CP0DJJ0 459 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 CCND2P30279 289 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 C2orf54Q08AI8 447 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 ALX1Q15699 326 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 RFX6Q8HWS3 928 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 TRIM11Q96F44 468 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 ZDHHC9Q9Y397 364 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 MAP3K4Q9Y6R4 1608 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 CCT5P48643 541 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 LIG3P49916 1009 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 RINT1Q6NUQ1 792 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 PODNQ7Z5L7 613 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 GOLPH3LQ9H4A5 285 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 RNF14Q9UBS8 474 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 PCDHA6Q9UN73 950 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 PCDHA8Q9Y5H6 950 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 A2ML1A8K2U0 1454 aa12.71□□□□□ -0.37
SMARCAD1-204ENST00000457823 ARHGAP42A6NI28 874 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 FOXO4P98177 505 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 PDE1BQ01064 536 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 UNC13DQ70J99 1090 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 CALN1Q9BXU9 219 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 CCDC38Q502W7 563 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 ARHGAP31Q2M1Z3 1444 aa12.71□□□□□ -0.38
SMARCAD1-204ENST00000457823 USP17L10C9JJH3 530 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 DYNLT1P63172 113 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 KIF22Q14807 665 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 DALRD3Q5D0E6 543 aaKnown RBP12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 DNAJC24Q6P3W2 148 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 EXOC8Q8IYI6 725 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 FAM84BQ96KN1 310 aaPredicted RBP12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 NUF2Q9BZD4 464 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 MRPL47Q9HD33 250 aaKnown RBP12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 STK36Q9NRP7 1315 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 PSAPP07602 524 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 INHBAP08476 426 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 AP3B2Q13367 1082 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 NXNQ6DKJ4 435 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 SARM1Q6SZW1 724 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 FAN1Q9Y2M0 1017 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 E9PMD0 336 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 PRCPP42785 496 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 CLNS1AP54105 237 aaKnown RBP12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 RPUSD2Q8IZ73 545 aaKnown RBP12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 CCNYQ8ND76 341 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 AP5M1Q9H0R1 490 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 UTYO14607 1347 aa12.7□□□□□ -0.38
SMARCAD1-204ENST00000457823 ZNF233A6NK53 670 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 ATP8B1O43520 1251 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 ECEL1O95672 775 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 OSBPP22059 807 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 ARHGAP4P98171 946 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 SLC7A5Q01650 507 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 FAM83BQ5T0W9 1011 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 RNF10Q8N5U6 811 aaKnown RBP12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 LRRC8CQ8TDW0 803 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 CDKL2Q92772 493 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 SCYL1Q96KG9 808 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 RMDN3Q96TC7 470 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 COL15A1P39059 1388 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 LRRD1A4D1F6 860 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 OATP04181 439 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 MARK3P27448 753 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 NLRP4Q96MN2 994 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 PBKQ96KB5 322 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 CFAP57Q96MR6 1250 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 AP1M1Q9BXS5 423 aa12.69□□□□□ -0.38
SMARCAD1-204ENST00000457823 CPDO75976 1380 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms