RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 AGBL3Q8NEM8 1001 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 CCDC42Q96M95 316 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 ZSWIM4Q9H7M6 989 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 RGS17Q9UGC6 210 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-202ENST00000457422 MYO6Q9UM54 1294 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 POTEB2H3BUK9 544 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 KCNMA1Q12791 1236 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 ZYXQ15942 572 aaKnown RBP18.44■□□□□ 0.54
CCDC43-202ENST00000457422 FAM160B2Q86V87 743 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 PARD6BQ9BYG5 372 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 TSGA10Q9BZW7 698 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 ZHX3Q9H4I2 956 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 SH2D4AQ9H788 454 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 ARHGAP20Q9P2F6 1191 aa18.44■□□□□ 0.54
CCDC43-202ENST00000457422 PUF60Q9UHX1 559 aaKnown RBP18.44■□□□□ 0.54
CCDC43-202ENST00000457422 MIGA2Q7L4E1 593 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 MSANTD4Q8NCY6 345 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 TBC1D5Q92609 795 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 TANGO6Q9C0B7 1094 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 LACRTQ9GZZ8 138 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 FAM184BQ9ULE4 1060 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 RCCD1A6NED2 376 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 ZNF263O14978 683 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 CFBP00751 764 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 TFRCP02786 760 aaKnown RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 PLEKP08567 350 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 PNMA6AP0CW24 399 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 MAP3K10Q02779 954 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 CYP4A11Q02928 519 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 PAPD7Q5XG87 772 aaKnown RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 CC2D1AQ6P1N0 951 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 ZBED3Q96IU2 234 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 EIF2AK1Q9BQI3 630 aaKnown RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 REEP2Q9BRK0 252 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 PGAP2Q9UHJ9 254 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 ZNRF3Q9ULT6 936 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 TRAF3IP3Q9Y228 551 aa18.43■□□□□ 0.54
CCDC43-202ENST00000457422 MRPL11Q9Y3B7 192 aaKnown RBP18.43■□□□□ 0.54
CCDC43-202ENST00000457422 LRRC53A6NM62 1247 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 EML1O00423 815 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 EYA4O95677 639 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CAP2P40123 477 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 SPA17Q15506 151 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 NIM1KQ8IY84 436 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 SMCR8Q8TEV9 937 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-202ENST00000457422 FBXO41Q8TF61 875 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 WDR18Q9BV38 432 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 NUCKS1Q9H1E3 243 aaKnown RBP18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CEP72Q9P209 647 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 ANO9A1A5B4 782 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CTAGE15A4D2H0 777 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CCDC151A5D8V7 595 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CTAGE8P0CG41 777 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CASP5P51878 434 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 KIF5AQ12840 1032 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 BRD3Q15059 726 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 BMT2Q1RMZ1 405 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CTAGE6Q86UF2 777 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 CTAGE4Q8IX94 777 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 SYN2Q92777 582 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-202ENST00000457422 HSD17B14Q9BPX1 270 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 GLIS2Q9BZE0 524 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-202ENST00000457422 DEFB129Q9H1M3 183 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 ANKZF1Q9H8Y5 726 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 EHMT1Q9H9B1 1298 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 TUFT1Q9NNX1 390 aa18.42■□□□□ 0.54
CCDC43-202ENST00000457422 SSU72P8A0A1W2PR75 194 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 CETN3O15182 167 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 PSMD10O75832 226 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 KIF11P52732 1056 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 CYP27A1Q02318 531 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 PPP2R5CQ13362 524 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 MAPK8IP2Q13387 824 aaPredicted RBP18.41■□□□□ 0.54
CCDC43-202ENST00000457422 ADAM9Q13443 819 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
CCDC43-202ENST00000457422 RRAGAQ7L523 313 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 OTOP1Q7RTM1 612 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 SFR1Q86XK3 245 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 SLC5A5Q92911 643 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 PRDM10Q9NQV6 1147 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 FEM1BQ9UK73 627 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 RAB21Q9UL25 225 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 RABGAP1Q9Y3P9 1069 aa18.41■□□□□ 0.54
CCDC43-202ENST00000457422 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCDC43-202ENST00000457422 MUTP22033 750 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 KNOP1Q1ED39 458 aaKnown RBP18.4■□□□□ 0.54
CCDC43-202ENST00000457422 ASTE1Q2TB18 679 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-202ENST00000457422 SLC30A10Q6XR72 485 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 CACNA2D4Q7Z3S7 1137 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 BHMT2Q9H2M3 363 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 LOXHD1Q8IVV2 1947 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 PDXKO00764 312 aa18.4■□□□□ 0.54
CCDC43-202ENST00000457422 USO1O60763 962 aaKnown RBP18.4■□□□□ 0.54
CCDC43-202ENST00000457422 NOL4O94818 638 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms