RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 RBL2Q08999 1139 aa18.48■□□□□ 0.55
CPSF6-203ENST00000456847 HIC1Q14526 733 aa18.48■□□□□ 0.55
CPSF6-203ENST00000456847 PLA2G4DQ86XP0 818 aa18.48■□□□□ 0.55
CPSF6-203ENST00000456847 TIFAQ96CG3 184 aa18.48■□□□□ 0.55
CPSF6-203ENST00000456847 SLKQ9H2G2 1235 aaPredicted RBP18.48■□□□□ 0.55
CPSF6-203ENST00000456847 AGO4Q9HCK5 861 aaKnown RBP18.48■□□□□ 0.55
CPSF6-203ENST00000456847 NFASCO94856 1347 aa18.48■□□□□ 0.55
CPSF6-203ENST00000456847 TMEM265A0A087WTH1 108 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 GSTTP1A0A1W2PQM5 241 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 ADAMTS3O15072 1205 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 MARK3P27448 753 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 ANKRD1Q15327 319 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 WNT8BQ93098 351 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 VWCEQ96DN2 955 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 RNPEPQ9H4A4 650 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 SH3GLB2Q9NR46 395 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 SETD4Q9NVD3 440 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 MSRAQ9UJ68 235 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 DDX39AO00148 427 aaKnown RBP18.47■□□□□ 0.55
CPSF6-203ENST00000456847 CDKL5O76039 1030 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 PARNO95453 639 aaKnown RBP18.47■□□□□ 0.55
CPSF6-203ENST00000456847 THPOP40225 353 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 RAB30Q15771 203 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 NIPA1Q7RTP0 329 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 SERINC5Q86VE9 423 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 GUCD1Q96NT3 240 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 PBX4Q9BYU1 374 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 TTYH1Q9H313 450 aaPredicted RBP18.47■□□□□ 0.55
CPSF6-203ENST00000456847 SEMA6BQ9H3T3 888 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 ERAP1Q9NZ08 941 aa18.47■□□□□ 0.55
CPSF6-203ENST00000456847 MEIS1O00470 390 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 TREHO43280 583 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 PBX2P40425 430 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 TRIM71Q2Q1W2 868 aaKnown RBP18.46■□□□□ 0.55
CPSF6-203ENST00000456847 ZNF618Q5T7W0 954 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 TET1Q8NFU7 2136 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 SMARCAD1Q9H4L7 1026 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 AZI2Q9H6S1 392 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 STXBP5LQ9Y2K9 1186 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 EMSYQ7Z589 1322 aa18.46■□□□□ 0.55
CPSF6-203ENST00000456847 FAM86B1E9PN63 330 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 CYP3A4P08684 503 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 FAM86B2P0C5J1 330 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 AK2P54819 239 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 SETQ01105 290 aaPredicted RBP18.45■□□□□ 0.54
CPSF6-203ENST00000456847 SCRN1Q12765 414 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 LMBR1Q8WVP7 490 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 TPCN1Q9ULQ1 816 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 ATP2A2P16615 1042 aaKnown RBP18.45■□□□□ 0.54
CPSF6-203ENST00000456847 HOXC8P31273 242 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 ACTR2P61160 394 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 PPFIA1Q13136 1202 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 ITGB3BPQ13352 177 aaPredicted RBP18.45■□□□□ 0.54
CPSF6-203ENST00000456847 TCEAL9Q9UHQ7 104 aa18.45■□□□□ 0.54
CPSF6-203ENST00000456847 KCNJ6P48051 423 aa18.44■□□□□ 0.54
CPSF6-203ENST00000456847 UIMC1Q96RL1 719 aa18.44■□□□□ 0.54
CPSF6-203ENST00000456847 PCDHA4Q9UN74 947 aa18.44■□□□□ 0.54
CPSF6-203ENST00000456847 NRCAMQ92823 1304 aa18.44■□□□□ 0.54
CPSF6-203ENST00000456847 RSPH10B2B2RC85 870 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 PFKFB2O60825 505 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 NBNO60934 754 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 BAIAP3O94812 1187 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 SEC24BO95487 1268 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 CTSHP09668 335 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 RSPH10BP0C881 870 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 RABGGTBP53611 331 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 CNKSR3Q6P9H4 555 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 CRYGNQ8WXF5 182 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 SLC9A7Q96T83 725 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 CDX2Q99626 313 aaPredicted RBP18.43■□□□□ 0.54
CPSF6-203ENST00000456847 ZNF577Q9BSK1 485 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 ZNF576Q9H609 170 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 TRPC6Q9Y210 931 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 IGLV3-22A0A075B6J6 115 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 LGR5O75473 907 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 GRIK4Q16099 956 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 PRR16Q569H4 304 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 MYLIPQ8WY64 445 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 PTPRSQ13332 1948 aa18.43■□□□□ 0.54
CPSF6-203ENST00000456847 IPO5O00410 1097 aaKnown RBP18.42■□□□□ 0.54
CPSF6-203ENST00000456847 BACH1O14867 736 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 CXCL10P02778 98 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 NEK4P51957 841 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 IGBP1P78318 339 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 TRAF7Q6Q0C0 670 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 BLIDQ8IZY5 108 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 PCYT2Q99447 389 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 STK36Q9NRP7 1315 aa18.42■□□□□ 0.54
CPSF6-203ENST00000456847 CAND2O75155 1236 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 XBP1P17861 261 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 GPNMBQ14956 572 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 FAM160B1Q5W0V3 765 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 TNPO1Q92973 898 aaKnown RBP18.41■□□□□ 0.54
CPSF6-203ENST00000456847 SLC28A3Q9HAS3 691 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 TUBE1Q9UJT0 475 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 YBX2Q9Y2T7 364 aaKnown RBP18.41■□□□□ 0.54
CPSF6-203ENST00000456847 STAT5BP51692 787 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms