RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SNX29Q8TEQ0 813 aa13.73□□□□□ -0.21
LINC00959-201ENST00000456581 DCAF4Q8WV16 495 aa13.73□□□□□ -0.21
LINC00959-201ENST00000456581 TBC1D5Q92609 795 aa13.73□□□□□ -0.21
LINC00959-201ENST00000456581 SECISBP2LQ93073 1101 aaKnown RBP13.73□□□□□ -0.21
LINC00959-201ENST00000456581 CCDC42Q96M95 316 aa13.73□□□□□ -0.21
LINC00959-201ENST00000456581 AK8Q96MA6 479 aa13.73□□□□□ -0.21
LINC00959-201ENST00000456581 GBP3Q9H0R5 595 aa13.73□□□□□ -0.21
LINC00959-201ENST00000456581 CWC15Q9P013 229 aaKnown RBP13.73□□□□□ -0.21
LINC00959-201ENST00000456581 SAMM50Q9Y512 469 aa13.73□□□□□ -0.21
LINC00959-201ENST00000456581 ESYT3A0FGR9 886 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 MYMKA6NI61 221 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 MARCH6O60337 910 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 EIF4A3P38919 411 aaKnown RBP13.72□□□□□ -0.21
LINC00959-201ENST00000456581 SLC20A2Q08357 652 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 TUBB2AQ13885 445 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 CYP2W1Q8TAV3 490 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 ARL8AQ96BM9 186 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 TUBB2BQ9BVA1 445 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 TMOD2Q9NZR1 351 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 OPLAHO14841 1288 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 BMP3P12645 472 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 CCT5P48643 541 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 GFPT1Q06210 699 aaPredicted RBP13.72□□□□□ -0.21
LINC00959-201ENST00000456581 KCTD16Q68DU8 428 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 CCNI2Q6ZMN8 369 aaPredicted RBP13.72□□□□□ -0.21
LINC00959-201ENST00000456581 PSMD1Q99460 953 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 IFIH1Q9BYX4 1025 aaKnown RBP13.72□□□□□ -0.21
LINC00959-201ENST00000456581 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
LINC00959-201ENST00000456581 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
LINC00959-201ENST00000456581 CCNE1P24864 410 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
LINC00959-201ENST00000456581 KRT83P78385 493 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 ZBED6P86452 979 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 KIF5AQ12840 1032 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 KCNB1Q14721 858 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 FAM83BQ5T0W9 1011 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 RRAGAQ7L523 313 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 CALML4Q96GE6 196 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 ANO3Q9BYT9 981 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 TBC1D7Q9P0N9 293 aa13.72□□□□□ -0.21
LINC00959-201ENST00000456581 LRRC53A6NM62 1247 aa13.71□□□□□ -0.21
LINC00959-201ENST00000456581 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
LINC00959-201ENST00000456581 DGKZQ13574 1117 aa13.71□□□□□ -0.21
LINC00959-201ENST00000456581 KAT2BQ92831 832 aa13.71□□□□□ -0.21
LINC00959-201ENST00000456581 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.21
LINC00959-201ENST00000456581 NLRC4Q9NPP4 1024 aa13.71□□□□□ -0.21
LINC00959-201ENST00000456581 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.21
LINC00959-201ENST00000456581 PACSIN2Q9UNF0 486 aaPredicted RBP13.71□□□□□ -0.21
LINC00959-201ENST00000456581 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.21
LINC00959-201ENST00000456581 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.22
LINC00959-201ENST00000456581 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.22
LINC00959-201ENST00000456581 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 CCDC174Q6PII3 467 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 NIM1KQ8IY84 436 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 FGFBP2Q9BYJ0 223 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 DEF6Q9H4E7 631 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 MED4Q9NPJ6 270 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 PRR12Q9ULL5 1215 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 ZNRF3Q9ULT6 936 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 PCDHA13Q9Y5I0 950 aa13.71□□□□□ -0.22
LINC00959-201ENST00000456581 ASTN2O75129 1339 aaPredicted RBP13.71□□□□□ -0.22
LINC00959-201ENST00000456581 WNT10BO00744 389 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00959-201ENST00000456581 LIG3P49916 1009 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 KIF11P52732 1056 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 VAV2P52735 878 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 UBXN2AP68543 259 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 RASSF7Q02833 373 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 ARID5AQ03989 594 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 PRR16Q569H4 304 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 PPP1R18Q6NYC8 613 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 FBXO11Q86XK2 927 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 PCDHA12Q9UN75 941 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00959-201ENST00000456581 TMEM266Q2M3C6 531 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 PPP4R3AQ6IN85 833 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 GMCL1P1Q8NEA9 526 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 FAM151AQ8WW52 585 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 LARP4BQ92615 738 aaKnown RBP13.7□□□□□ -0.22
LINC00959-201ENST00000456581 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 ZBTB21Q9ULJ3 1066 aa13.7□□□□□ -0.22
LINC00959-201ENST00000456581 GOLGA6BA6NDN3 693 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 E9PMD0 336 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 AKR1B10O60218 316 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 ATP1A2P50993 1020 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 NAP1L1P55209 391 aaKnown RBP13.69□□□□□ -0.22
LINC00959-201ENST00000456581 SPA17Q15506 151 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 SV2BQ7L1I2 683 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 DHTKD1Q96HY7 919 aaPredicted RBP13.69□□□□□ -0.22
LINC00959-201ENST00000456581 GMCL1Q96IK5 515 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 C7orf25Q9BPX7 421 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 TANGO6Q9C0B7 1094 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 PCNTO95613 3336 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 NPHP3-ACAD11A0A0J9YXS1 232 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
LINC00959-201ENST00000456581 POTECB2RU33 542 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms