RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 VEZTQ9HBM0 779 aa20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 GHRP10912 638 aa20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 CTNNA1P35221 906 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 KLHL7Q8IXQ5 586 aa20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 CACNA2D3Q8IZS8 1091 aa20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 PBKQ96KB5 322 aa20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 TSG101Q99816 390 aa20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 CENPHQ9H3R5 247 aa20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 NIP7Q9Y221 180 aaKnown RBP eCLIP20.74■□□□□ 0.91
SEMA3B-208ENST00000456210 CYTH3O43739 400 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 CCNT1O60563 726 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 ZPR1O75312 459 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 DNAJC8O75937 253 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 SCTRP47872 440 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 GRB10Q13322 594 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 NONOQ15233 471 aaKnown RBP eCLIP20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 TAF4BQ92750 862 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 N4BP2L2Q92802 583 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 NSUN4Q96CB9 384 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 NLRC4Q9NPP4 1024 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 PACSIN2Q9UNF0 486 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 MYH7BA7E2Y1 1941 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 TECP42680 631 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 DNA2P51530 1060 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 PSMD2Q13200 908 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 UBE4AQ14139 1066 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 TBC1D5Q92609 795 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 MIEF2Q96C03 454 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 KDM4CQ9H3R0 1056 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 IL17RBQ9NRM6 502 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 HAUS2Q9NVX0 235 aa20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 TPX2Q9ULW0 747 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-208ENST00000456210 CYP2D6P10635 497 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 GCFC2P16383 781 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 SLC8A1P32418 973 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 USP11P51784 963 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 RPS6KA1Q15418 735 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 KIAA0753Q2KHM9 967 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 LETM2Q2VYF4 491 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 ZCWPW2Q504Y3 356 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 NEK8Q86SG6 692 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 OR2W6PQ8NHA6 318 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 RAPGEF5Q92565 580 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 AIPL1Q9NZN9 384 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 COL4A3BPQ9Y5P4 624 aa20.72■□□□□ 0.91
SEMA3B-208ENST00000456210 A0A087X0T9 212 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 KIF4AO95239 1232 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 FAM228BP0C875 321 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 PDHBP11177 359 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 C10orf76Q5T2E6 689 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 CLEC4GQ6UXB4 293 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 CCT6BQ92526 530 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 LARP4BQ92615 738 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 CNOT8Q9UFF9 292 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 MGRN1O60291 552 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 TMOD1P28289 359 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 GKAP1Q5VSY0 366 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 PNMA5Q96PV4 448 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 ATP6V0A4Q9HBG4 840 aa20.71■□□□□ 0.91
SEMA3B-208ENST00000456210 TAF1LQ8IZX4 1826 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 CCDC188H7C350 402 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 CLGNO14967 610 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 NTSR2O95665 410 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 ZBTB48P10074 688 aaPredicted RBP20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 EZRP15311 586 aaKnown RBP20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 NBPF9Q3BBW0 867 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 BANK1Q8NDB2 785 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 LZTS2Q9BRK4 669 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 NEUROG2Q9H2A3 272 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 ATP8B3O60423 1300 aa20.7■□□□□ 0.9
SEMA3B-208ENST00000456210 PALM3A6NDB9 673 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 KCNK3O14649 394 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 RNASE9P60153 205 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 POLR2FP61218 127 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 FKBP3Q00688 224 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 TFAP4Q01664 338 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 CAVIN4Q5BKX8 364 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 SEC14L1Q92503 715 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 UPF1Q92900 1129 aaKnown RBP eCLIP20.69■□□□□ 0.95e-9■■■■■ 29.1
SEMA3B-208ENST00000456210 CENPTQ96BT3 561 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 PACSIN1Q9BY11 444 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 CNOT10Q9H9A5 744 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 FBXL5Q9UKA1 691 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 CNTNAP4Q9C0A0 1308 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 PLSCR1O15162 318 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 DRD4P21917 467 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 FXR2P51116 673 aaKnown RBP eCLIP20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 MARSP56192 900 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 MECOMQ03112 1051 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 CRYMQ14894 314 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 SPDYCQ5MJ68 293 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 TLDC1Q6P9B6 456 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 AMIGO3Q86WK7 504 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 CEP63Q96MT8 703 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 LRRC27Q9C0I9 530 aa20.69■□□□□ 0.9
SEMA3B-208ENST00000456210 SWAP70Q9UH65 585 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms