RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 CYTH3O43739 400 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 VIL1P09327 827 aaKnown RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 SLURP2P0DP57 97 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 GHRP10912 638 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 ATP4AP20648 1035 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 CMA1P23946 247 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 NDUFA8P51970 172 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 EIF6P56537 245 aaKnown RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 NLRP5P59047 1200 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 ELF3P78545 371 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 GOLGA8FQ08AF8 430 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 GOLGA8DPQ0D2H9 430 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 IFT88Q13099 833 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 R3HDM1Q15032 1099 aaKnown RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 NPY5RQ15761 445 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 SLC35G1Q2M3R5 365 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 USP17L2Q6R6M4 530 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 NIM1KQ8IY84 436 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 MYCBPAPQ8TBZ2 947 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 AENQ8WTP8 325 aaKnown RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 RUBCNQ92622 972 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 NAPGQ99747 312 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-218ENST00000456174 TRIM7Q9C029 511 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 SH3GLB2Q9NR46 395 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 SLC5A4Q9NY91 659 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 MYO1AQ9UBC5 1043 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 PI4KBQ9UBF8 816 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 NUB1Q9Y5A7 615 aa8.39□□□□□ -1.07
HDAC9-218ENST00000456174 FAM205CA6NFA0 338 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 DNM1LO00429 736 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 NPTXRO95502 500 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 TTLL1O95922 423 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 FAM107AO95990 144 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 EARS2Q5JPH6 523 aaKnown RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 TMCO4Q5TGY1 634 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 SH3BP5LQ7L8J4 393 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 NLRP14Q86W24 1093 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 CLEC10AQ8IUN9 316 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 LRRC47Q8N1G4 583 aaKnown RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 GPKOWQ92917 476 aaPredicted RBP eCLIP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 CCDC17Q96LX7 622 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ANKRD27Q96NW4 1050 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 CCT8L2Q96SF2 557 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 GMLQ99445 158 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 SPZ1Q9BXG8 430 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 TRIM4Q9C037 500 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 HDAC9Q9UKV0 1011 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ZNRF3Q9ULT6 936 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ASB3Q9Y575 518 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 PCDHB6Q9Y5E3 794 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ADGRG1Q9Y653 693 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 FAM196BA6NMK8 535 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ENTPD3O75355 529 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ANP32DO95626 131 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 SSBP05455 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ATP1A3P13637 1013 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 CALML3P27482 149 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 LMOD1P29536 600 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 SCTRP47872 440 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 DYNC1I2Q13409 638 aaKnown RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 MYBPC3Q14896 1274 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 ALS2CLQ60I27 953 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 CCNI2Q6ZMN8 369 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 FOXP4Q8IVH2 680 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 OGFOD1Q8N543 542 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 TEX9Q8N6V9 391 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 C17orf50Q8WW18 174 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 TNFRSF25Q93038 417 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 RPGRIP1Q96KN7 1286 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 MOV10L1Q9BXT6 1211 aaKnown RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 OSBPL7Q9BZF2 842 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 CPVLQ9H3G5 476 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 INTS13Q9NVM9 706 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 NOP53Q9NZM5 478 aaKnown RBP8.38□□□□□ -1.07
HDAC9-218ENST00000456174 CEP131Q9UPN4 1083 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 PHF24Q9UPV7 400 aa8.38□□□□□ -1.07
HDAC9-218ENST00000456174 TRIM75PA6NK02 468 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 TMEM232C9JQI7 657 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 OPLAHO14841 1288 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 TPD52L2O43399 206 aaKnown RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 PPP1R37O75864 691 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 PFKFB1P16118 471 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 SMARCA1P28370 1054 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 CNGA1P29973 690 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 DLGAP5Q15398 846 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 TTMPQ5BVD1 217 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 ZNF569Q5MCW4 686 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 NUGGCQ68CJ6 796 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 SHC4Q6S5L8 630 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 HEATR3Q7Z4Q2 680 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 KRI1Q8N9T8 703 aaKnown RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 ZC3H15Q8WU90 426 aaKnown RBP8.37□□□□□ -1.07
HDAC9-218ENST00000456174 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
HDAC9-218ENST00000456174 DESI2Q9BSY9 194 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms