RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 TMEM260Q9NX78 707 aa20.23■□□□□ 0.83
COL13A1-206ENST00000456019 YBX2Q9Y2T7 364 aaKnown RBP20.23■□□□□ 0.83
COL13A1-206ENST00000456019 NBNO60934 754 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 THPOP40225 353 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 NTRK3Q16288 839 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 PKN1Q16512 942 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 CEP55Q53EZ4 464 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 MCTP2Q6DN12 878 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 CNKSR3Q6P9H4 555 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 MAFAQ8NHW3 353 aaPredicted RBP20.22■□□□□ 0.83
COL13A1-206ENST00000456019 PHKBQ93100 1093 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 RNF26Q9BY78 433 aaPredicted RBP20.22■□□□□ 0.83
COL13A1-206ENST00000456019 ZMYND12Q9H0C1 365 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 C6orf50Q9HD87 102 aa20.22■□□□□ 0.83
COL13A1-206ENST00000456019 TRIP12Q14669 1992 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-206ENST00000456019 GSTTP1A0A1W2PQM5 241 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 TREHO43280 583 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 IFNAR1P17181 557 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 TOB2Q14106 344 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-206ENST00000456019 JAKMIP3Q5VZ66 844 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 TRAF7Q6Q0C0 670 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 CYP2W1Q8TAV3 490 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 SDF4Q9BRK5 362 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 JPH1Q9HDC5 661 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-206ENST00000456019 SETD4Q9NVD3 440 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 ERAP1Q9NZ08 941 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 SLC9A2Q9UBY0 812 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 NFASCO94856 1347 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 EMSYQ7Z589 1322 aa20.21■□□□□ 0.83
COL13A1-206ENST00000456019 RSPH10B2B2RC85 870 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 CAND2O75155 1236 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 RSPH10BP0C881 870 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 GNA11P29992 359 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 ZNF76P36508 570 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 KCNJ6P48051 423 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.82
COL13A1-206ENST00000456019 ARHGAP4P98171 946 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 NIPA1Q7RTP0 329 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 GLG1Q92896 1179 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 SLC26A6Q9BXS9 759 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 SMARCAD1Q9H4L7 1026 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 NCOA5Q9HCD5 579 aaKnown RBP20.2■□□□□ 0.82
COL13A1-206ENST00000456019 NRCAMQ92823 1304 aa20.2■□□□□ 0.82
COL13A1-206ENST00000456019 CHD9Q3L8U1 2897 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 MEIS1O00470 390 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 ARP10275 920 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 MYOGP15173 224 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 PPP2R2DQ66LE6 453 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 HERC6Q8IVU3 1022 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 REXO1Q8N1G1 1221 aaKnown RBP20.19■□□□□ 0.82
COL13A1-206ENST00000456019 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 LMBR1Q8WVP7 490 aa20.19■□□□□ 0.82
COL13A1-206ENST00000456019 ZNF274Q96GC6 653 aaPredicted RBP20.19■□□□□ 0.82
COL13A1-206ENST00000456019 GAS2L1Q99501 681 aaPredicted RBP20.19■□□□□ 0.82
COL13A1-206ENST00000456019 UPF3BQ9BZI7 483 aaKnown RBP20.19■□□□□ 0.82
COL13A1-206ENST00000456019 AGO4Q9HCK5 861 aaKnown RBP20.19■□□□□ 0.82
COL13A1-206ENST00000456019 GBF1Q92538 1859 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 ABHD14A-ACY1A0A1B0GW23 586 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 KIF28PB7ZC32 967 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 EFCAB14O75071 495 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 LGR5O75473 907 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 CYP3A4P08684 503 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 WDR5P61964 334 aaKnown RBP20.18■□□□□ 0.82
COL13A1-206ENST00000456019 ADAM17P78536 824 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 MBTPS1Q14703 1052 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 PRDM12Q9H4Q4 367 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 PDRG1Q9NUG6 133 aa20.18■□□□□ 0.82
COL13A1-206ENST00000456019 PPFIA3O75145 1194 aa20.17■□□□□ 0.82
COL13A1-206ENST00000456019 MARK3P27448 753 aa20.17■□□□□ 0.82
COL13A1-206ENST00000456019 PPFIA1Q13136 1202 aa20.17■□□□□ 0.82
COL13A1-206ENST00000456019 ITGB3BPQ13352 177 aaPredicted RBP20.17■□□□□ 0.82
COL13A1-206ENST00000456019 IKBKEQ14164 716 aa20.17■□□□□ 0.82
COL13A1-206ENST00000456019 CRYGNQ8WXF5 182 aa20.17■□□□□ 0.82
COL13A1-206ENST00000456019 AZI2Q9H6S1 392 aa20.17■□□□□ 0.82
COL13A1-206ENST00000456019 SH3GLB2Q9NR46 395 aa20.17■□□□□ 0.82
COL13A1-206ENST00000456019 FAM86B1E9PN63 330 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 CPLX1O14810 134 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 CA3P07451 260 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 FAM86B2P0C5J1 330 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 ACTR2P61160 394 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 SSRP1Q08945 709 aaKnown RBP20.16■□□□□ 0.82
COL13A1-206ENST00000456019 TAF2Q6P1X5 1199 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 PLA2G4DQ86XP0 818 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 TET1Q8NFU7 2136 aa20.16■□□□□ 0.82
COL13A1-206ENST00000456019 TNPO1Q92973 898 aaKnown RBP20.16■□□□□ 0.82
COL13A1-206ENST00000456019 CDH23Q9H251 3354 aa20.15■□□□□ 0.82
COL13A1-206ENST00000456019 ADAMTS3O15072 1205 aa20.15■□□□□ 0.82
COL13A1-206ENST00000456019 CTSHP09668 335 aa20.15■□□□□ 0.82
COL13A1-206ENST00000456019 GRIK4Q16099 956 aa20.15■□□□□ 0.82
COL13A1-206ENST00000456019 TCTN1Q2MV58 587 aa20.15■□□□□ 0.82
COL13A1-206ENST00000456019 CPLX2Q6PUV4 134 aaKnown RBP20.15■□□□□ 0.82
COL13A1-206ENST00000456019 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.15■□□□□ 0.82
COL13A1-206ENST00000456019 PCYT2Q99447 389 aa20.15■□□□□ 0.82
COL13A1-206ENST00000456019 LARP6Q9BRS8 491 aaKnown RBP20.15■□□□□ 0.82
COL13A1-206ENST00000456019 VPS54Q9P1Q0 977 aa20.15■□□□□ 0.82
COL13A1-206ENST00000456019 IGLV3-22A0A075B6J6 115 aa20.14■□□□□ 0.81
COL13A1-206ENST00000456019 TLL1O43897 1013 aa20.14■□□□□ 0.81
COL13A1-206ENST00000456019 EIF5BO60841 1220 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms