RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CIITAP33076 1130 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 SETQ01105 290 aaPredicted RBP19.74■□□□□ 0.75
USP39-208ENST00000455732 RPUSD2Q8IZ73 545 aaKnown RBP19.74■□□□□ 0.75
USP39-208ENST00000455732 BLIDQ8IZY5 108 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 C7orf31Q8N865 590 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 NSUN7Q8NE18 718 aaKnown RBP19.74■□□□□ 0.75
USP39-208ENST00000455732 WASF1Q92558 559 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 AGO4Q9HCK5 861 aaKnown RBP19.74■□□□□ 0.75
USP39-208ENST00000455732 ORC3Q9UBD5 711 aaPredicted RBP19.74■□□□□ 0.75
USP39-208ENST00000455732 NOD1Q9Y239 953 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 H3BRB1 525 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 FGBP02675 491 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 IQCF3P0C7M6 154 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 ARP10275 920 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 FDPSP14324 419 aaKnown RBP19.73■□□□□ 0.75
USP39-208ENST00000455732 XBP1P17861 261 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 ZNF76P36508 570 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 RBL2Q08999 1139 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 ST3GAL1Q11201 340 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 BFSP2Q13515 415 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 HIC1Q14526 733 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 RABEP1Q15276 862 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 ZNF697Q5TEC3 545 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 CAGE1Q8TC20 777 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 DHX38Q92620 1227 aaKnown RBP19.73■□□□□ 0.75
USP39-208ENST00000455732 PHF20Q9BVI0 1012 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 TUT1Q9H6E5 874 aaKnown RBP19.73■□□□□ 0.75
USP39-208ENST00000455732 JPH1Q9HDC5 661 aaPredicted RBP19.73■□□□□ 0.75
USP39-208ENST00000455732 CXXC1Q9P0U4 656 aaPredicted RBP19.73■□□□□ 0.75
USP39-208ENST00000455732 CHD9Q3L8U1 2897 aa19.73■□□□□ 0.75
USP39-208ENST00000455732 HOXC8P31273 242 aa19.72■□□□□ 0.75
USP39-208ENST00000455732 ITGB3BPQ13352 177 aaPredicted RBP19.72■□□□□ 0.75
USP39-208ENST00000455732 SEPT1Q8WYJ6 367 aa19.72■□□□□ 0.75
USP39-208ENST00000455732 SDF4Q9BRK5 362 aa19.72■□□□□ 0.75
USP39-208ENST00000455732 PKD2L1Q9P0L9 805 aa19.72■□□□□ 0.75
USP39-208ENST00000455732 SLC9A2Q9UBY0 812 aa19.72■□□□□ 0.75
USP39-208ENST00000455732 ZNF215Q9UL58 517 aaPredicted RBP19.72■□□□□ 0.75
USP39-208ENST00000455732 CDH23Q9H251 3354 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 PFKMP08237 780 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 RFC2P35250 354 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 USP11P51784 963 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 ZNF200P98182 395 aaPredicted RBP19.71■□□□□ 0.75
USP39-208ENST00000455732 SP4Q02446 784 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 OTOP2Q7RTS6 562 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 PLA2G4DQ86XP0 818 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 RETREG2Q8NC44 543 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 AFAP1L1Q8TED9 768 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 ZSCAN31Q96LW9 406 aaPredicted RBP19.71■□□□□ 0.75
USP39-208ENST00000455732 FAM161BQ96MY7 647 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 TBC1D32Q96NH3 1257 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 GUCD1Q96NT3 240 aa19.71■□□□□ 0.75
USP39-208ENST00000455732 TTYH1Q9H313 450 aaPredicted RBP19.71■□□□□ 0.75
USP39-208ENST00000455732 SH2B1Q9NRF2 756 aaPredicted RBP19.71■□□□□ 0.75
USP39-208ENST00000455732 PTPRSQ13332 1948 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 CUL9Q8IWT3 2517 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 GSTTP1A0A1W2PQM5 241 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 EDIL3O43854 480 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 TCF7P36402 384 aaPredicted RBP19.7■□□□□ 0.74
USP39-208ENST00000455732 PTK7Q13308 1070 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 TRIM71Q2Q1W2 868 aaKnown RBP19.7■□□□□ 0.74
USP39-208ENST00000455732 KRT25Q7Z3Z0 450 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 DEFB128Q7Z7B8 93 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 TRIM50Q86XT4 487 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 CCDC155Q8N6L0 562 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 LENG9Q96B70 501 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 SEMA6BQ9H3T3 888 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 KCNJ14Q9UNX9 436 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 WDR81Q562E7 1941 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 EMSYQ7Z589 1322 aa19.7■□□□□ 0.74
USP39-208ENST00000455732 TMEM265A0A087WTH1 108 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 GRXCR1A8MXD5 290 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 IPO5O00410 1097 aaKnown RBP19.69■□□□□ 0.74
USP39-208ENST00000455732 JAK2O60674 1132 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 LGR5O75473 907 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 DNAJB2P25686 324 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 GPNMBQ14956 572 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 TBCKQ8TEA7 893 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 WNT8BQ93098 351 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
USP39-208ENST00000455732 MTIF3Q9H2K0 278 aaKnown RBP19.69■□□□□ 0.74
USP39-208ENST00000455732 RNPEPQ9H4A4 650 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 GTF3C3Q9Y5Q9 886 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 EYSQ5T1H1 3165 aa19.69■□□□□ 0.74
USP39-208ENST00000455732 CYP3A7-CYP3A51PA0A087WV96 503 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 DHX15O43143 795 aaKnown RBP19.68■□□□□ 0.74
USP39-208ENST00000455732 ST18O60284 1047 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 SMIM10L2AP0DMW4 78 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 SMIM10L2BP0DMW5 78 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 CKBP12277 381 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 SELPP16109 830 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 CYP3A7P24462 503 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 ACTR2P61160 394 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 NONOQ15233 471 aaKnown RBP eCLIP19.68■□□□□ 0.74
USP39-208ENST00000455732 PRR16Q569H4 304 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 UTP14CQ5TAP6 766 aaKnown RBP19.68■□□□□ 0.74
USP39-208ENST00000455732 MOXD1Q6UVY6 613 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 SERINC5Q86VE9 423 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 ZNF577Q9BSK1 485 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 PBX4Q9BYU1 374 aa19.68■□□□□ 0.74
USP39-208ENST00000455732 TBC1D22BQ9NU19 505 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms