RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TTLL11Q8NHH1 800 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 SH3TC2Q8TF17 1288 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 DPF3Q92784 378 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 ARHGAP39Q9C0H5 1083 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 PNNQ9H307 717 aaKnown RBP4.76□□□□□ -1.65
RBM39-220ENST00000455343 ATP13A1Q9HD20 1204 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 HYPKQ9NX55 129 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 PCDHB5Q9Y5E4 795 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 ST14Q9Y5Y6 855 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 MUC3AQ02505 3323 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 AOX1Q06278 1338 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 IRS2Q9Y4H2 1338 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 POLR2AP24928 1970 aaKnown RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 LRRC10BA6NIK2 292 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 DBX1A6NMT0 343 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 GFRA2O00451 464 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 GJB1P08034 283 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 KLRK1P26718 216 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 GRK4P32298 578 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 TMPOP42166 694 aaKnown RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 AFMP43652 599 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 LIG3P49916 1009 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 LACTBP83111 547 aaPredicted RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 RASA3Q14644 834 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 DLGAP5Q15398 846 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 TAF1CQ15572 869 aaPredicted RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 PKN1Q16512 942 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 FYB2Q5VWT5 728 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 ZNF746Q6NUN9 644 aaPredicted RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 C17orf99Q6UX52 265 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 THAP5Q7Z6K1 395 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 NPAS4Q8IUM7 802 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 KSR1Q8IVT5 923 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.75□□□□□ -1.65
RBM39-220ENST00000455343 RIN3Q8TB24 985 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 OPTNQ96CV9 577 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 PRMT6Q96LA8 375 aaPredicted RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 TEPSINQ96N21 525 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 CDC5LQ99459 802 aaKnown RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 TRAIPQ9BWF2 469 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 CD209Q9NNX6 404 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 ZCCHC17Q9NP64 241 aaKnown RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 RNF19AQ9NV58 838 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 C19orf73Q9NVV2 129 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 FAM53CQ9NYF3 392 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 PCDHAC2Q9Y5I4 1007 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 TACC3Q9Y6A5 838 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 AK5Q9Y6K8 562 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 LAMB2P55268 1798 aa4.75□□□□□ -1.65
RBM39-220ENST00000455343 RBBP6Q7Z6E9 1792 aaKnown RBP4.75□□□□□ -1.65
RBM39-220ENST00000455343 MAPK8IP3Q9UPT6 1336 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 CCL15-CCL14A0A0B4J2E2 113 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 PATL2C9JE40 543 aaKnown RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 CTGFP29279 349 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 BMP8BP34820 402 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 GTF2A2P52657 109 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 CTSWP56202 376 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 FKBP1AP62942 108 aaKnown RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 LMOD3Q0VAK6 560 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 MLANAQ16655 118 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 CCL15Q16663 113 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 CFAP100Q494V2 611 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 AGMOQ6ZNB7 445 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 C15orf52Q6ZUT6 534 aaKnown RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 JARID2Q92833 1246 aaPredicted RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 COX4I2Q96KJ9 171 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 SLC38A3Q99624 504 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 DUSP9Q99956 384 aaKnown RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 HTATIP2Q9BUP3 242 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 PCGF6Q9BYE7 350 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 GREM2Q9H772 168 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 PHAXQ9H814 394 aaKnown RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 CWC25Q9NXE8 425 aaPredicted RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 TJP2Q9UDY2 1190 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 SRRDQ9UH36 339 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 STXBP5LQ9Y2K9 1186 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 NR2E3Q9Y5X4 410 aa4.74□□□□□ -1.65
RBM39-220ENST00000455343 DDX60Q8IY21 1712 aaKnown RBP4.74□□□□□ -1.65
RBM39-220ENST00000455343 TAF1P21675 1872 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 LAMA2P24043 3122 aaKnown RBP4.73□□□□□ -1.65
RBM39-220ENST00000455343 EYSQ5T1H1 3165 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 CLRN2A0PK11 232 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 BTBD19C9JJ37 291 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 RBAK-RBAKDNI3L0D1 243 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 MYO1BO43795 1136 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 CBX7O95931 251 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 IGKV5-2P06315 115 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 GLI1P08151 1106 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 IL1R1P14778 569 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 CAPN2P17655 700 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 KIR3DL1P43629 444 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 VGLL4Q14135 290 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 LRIT3Q3SXY7 679 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 MEI1Q5TIA1 1274 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 MRPL41Q8IXM3 137 aaKnown RBP4.73□□□□□ -1.65
RBM39-220ENST00000455343 BHLHE22Q8NFJ8 381 aaPredicted RBP4.73□□□□□ -1.65
RBM39-220ENST00000455343 LIN37Q96GY3 246 aaPredicted RBP4.73□□□□□ -1.65
RBM39-220ENST00000455343 KIRREL1Q96J84 757 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 MYD88Q99836 296 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms