RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CHMP2AO43633 222 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 GH1P01241 217 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 PTMSP20962 102 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 CDC25AP30304 524 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 LAMC2Q13753 1193 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 EPHA7Q15375 998 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 MIER3Q7Z3K6 550 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 CTU1Q7Z7A3 348 aaKnown RBP18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 DHX37Q8IY37 1157 aaKnown RBP18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 GOLPH3LQ9H4A5 285 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 MLXIPQ9HAP2 919 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 SEPT4O43236 478 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 ATG7O95352 703 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 INHAP05111 366 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 PFKFB1P16118 471 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 UBA7P41226 1012 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 ACTR2P61160 394 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 GJC2Q5T442 439 aaPredicted RBP18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 KRT79Q5XKE5 535 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 FSIP1Q8NA03 581 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 ERMNQ8TAM6 284 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 HSD17B14Q9BPX1 270 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 DISC1Q9NRI5 854 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 FAM13BQ9NYF5 915 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 Q9Y3F1 56 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 TELO2Q9Y4R8 837 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 PCDHA10Q9Y5I2 948 aa18.64■□□□□ 0.58
CCDC90B-202ENST00000455220 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 POTEFA5A3E0 1075 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 PTGS1P23219 599 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 TXLNAP40222 546 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 HSDL1Q3SXM5 330 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 HYIQ5T013 277 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 ABHD15Q6UXT9 468 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 CABP7Q86V35 215 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 NEK9Q8TD19 979 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 SNX29Q8TEQ0 813 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 GPR20Q99678 358 aa18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 EIF2AK1Q9BQI3 630 aaKnown RBP18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 POLR3CQ9BUI4 534 aaPredicted RBP18.64■□□□□ 0.57
CCDC90B-202ENST00000455220 WDR81Q562E7 1941 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 GSTTP1A0A1W2PQM5 241 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 SORBS3O60504 671 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 DUSP11O75319 330 aaKnown RBP18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 RPA1P27694 616 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 CCND3P30281 292 aaPredicted RBP18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 PPTC7Q8NI37 304 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 SEPT1Q8WYJ6 367 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 SPATA33Q96N06 139 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 KCNH3Q9ULD8 1083 aa18.63■□□□□ 0.57
CCDC90B-202ENST00000455220 A0A087X0B3 334 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 IGKV6D-21A0A0A0MT36 114 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 MED24O75448 989 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 SLITRK3O94933 977 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 SUPT20HL2P0C7V6 817 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 MUTP22033 750 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 NDUFA8P51970 172 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 SP4Q02446 784 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 TPRNQ4KMQ1 711 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 TLK2Q86UE8 772 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 ENGASEQ8NFI3 743 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 OR6J1Q8NGC5 347 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 TUFT1Q9NNX1 390 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 SAMM50Q9Y512 469 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 KDM3AQ9Y4C1 1321 aa18.62■□□□□ 0.57
CCDC90B-202ENST00000455220 P4HBP07237 508 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 PSAPP07602 524 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 HOXD8P13378 290 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 LIG1P18858 919 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 CCT6AP40227 531 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 FAM160A1Q05DH4 1040 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 GRB10Q13322 594 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 SNW1Q13573 536 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 KARSQ15046 597 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 PKN2Q16513 984 aaKnown RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 TMEM119Q4V9L6 283 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 MIS18BP1Q6P0N0 1132 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 FBXO46Q6PJ61 603 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 FMR1NBQ8N0W7 255 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 GPT2Q8TD30 523 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 LENG1Q96BZ8 264 aaPredicted RBP18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 PNMA5Q96PV4 448 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 RGL1Q9NZL6 768 aa18.61■□□□□ 0.57
CCDC90B-202ENST00000455220 NOP56O00567 594 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 MBD3O95983 291 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 CNGA1P29973 690 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 NKX3-2P78367 333 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 ECM1Q16610 540 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 KCTD17Q8N5Z5 321 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 SH3TC2Q8TF17 1288 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 CALML4Q96GE6 196 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 DYDC2Q96IM9 177 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 PYM1Q9BRP8 204 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 NT5C3AQ9H0P0 336 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms