RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 CTC1Q2NKJ3 1217 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 POTEHQ6S545 545 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 ADGRD2Q7Z7M1 963 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 RNF135Q8IUD6 432 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 PRSS33Q8NF86 280 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 LINC01599Q8WXQ3 324 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 IL17RAQ96F46 866 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 GPR20Q99678 358 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 RC3H2Q9HBD1 1191 aaKnown RBP8.15□□□□□ -1.1
CHEK2-220ENST00000454252 ALG13Q9NP73 1137 aaKnown RBP8.15□□□□□ -1.1
CHEK2-220ENST00000454252 CTNNA3Q9UI47 895 aa8.15□□□□□ -1.1
CHEK2-220ENST00000454252 ADGRA3Q8IWK6 1321 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 PALM3A6NDB9 673 aaPredicted RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 GCOM1H8Y6P7 765 aaPredicted RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 MBTPS2O43462 519 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 POLR2MP0CAP2 368 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 CCND2P30279 289 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 BMPR1AP36894 532 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 ADAM17P78536 824 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 LPIN1Q14693 890 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 SMAD2Q15796 467 aaKnown RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 PUS10Q3MIT2 529 aaKnown RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 IFIT1BQ5T764 474 aaKnown RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 FIBCD1Q8N539 461 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 UBAC1Q9BSL1 405 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 AGO3Q9H9G7 860 aaKnown RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 FAM86C1Q9NVL1 165 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 PKD2L1Q9P0L9 805 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 ZBTB47Q9UFB7 747 aaPredicted RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 MRPL42Q9Y6G3 142 aaKnown RBP8.14□□□□□ -1.11
CHEK2-220ENST00000454252 CFAP54Q96N23 3096 aa8.14□□□□□ -1.11
CHEK2-220ENST00000454252 SPATA31C2B4DYI2 1134 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 C5orf67F2Z3F1 127 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 ENPP3O14638 875 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 ATP9AO75110 1047 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 MGAT3Q09327 533 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 TMEM62Q0P6H9 643 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 COL9A3Q14050 684 aaPredicted RBP8.13□□□□□ -1.11
CHEK2-220ENST00000454252 PAN2Q504Q3 1202 aaKnown RBP8.13□□□□□ -1.11
CHEK2-220ENST00000454252 USP17L6PQ6QN14 398 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 METTL7BQ6UX53 244 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 SAMD11Q96NU1 681 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 INPP4AQ96PE3 977 aaPredicted RBP8.13□□□□□ -1.11
CHEK2-220ENST00000454252 C11orf84Q9BUA3 381 aaPredicted RBP8.13□□□□□ -1.11
CHEK2-220ENST00000454252 MYL10Q9BUA6 226 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 DIAPH3Q9NSV4 1193 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 CLEC1BQ9P126 229 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 HCSTQ9UBK5 93 aa8.13□□□□□ -1.11
CHEK2-220ENST00000454252 BARX2Q9UMQ3 279 aaPredicted RBP8.13□□□□□ -1.11
CHEK2-220ENST00000454252 COL4A6Q14031 1691 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 FRMPD4Q14CM0 1322 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 STXBP3O00186 592 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 GLP2RO95838 553 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 ITGB1P05556 798 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 TGFB3P10600 412 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 CD52P31358 61 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 IGBP1P78318 339 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 SMAD4Q13485 552 aaKnown RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 BTG3Q14201 252 aaPredicted RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 GRM4Q14833 912 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 IMMTQ16891 758 aaKnown RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 CCDC178Q5BJE1 867 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 HERC4Q5GLZ8 1057 aaPredicted RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 FAM26DQ5JW98 314 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 MARCH8Q5T0T0 291 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 KCNV1Q6PIU1 500 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 RBM23Q86U06 439 aaKnown RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 RTN4RL1Q86UN2 441 aaPredicted RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 VN1R2Q8NFZ6 395 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 TRAPPC12Q8WVT3 735 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 DNAJB3Q8WWF6 145 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 ZNF689Q96CS4 500 aaPredicted RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 MSLNLQ96KJ4 702 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 USP26Q9BXU7 913 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 MAF1Q9H063 256 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 FAM49AQ9H0Q0 323 aaPredicted RBP8.12□□□□□ -1.11
CHEK2-220ENST00000454252 RIOX1Q9H6W3 641 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 PRKAG3Q9UGI9 489 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 CD207Q9UJ71 328 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 CDH22Q9UJ99 828 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 PLAGL2Q9UPG8 496 aa8.12□□□□□ -1.11
CHEK2-220ENST00000454252 TRIP12Q14669 1992 aaPredicted RBP8.11□□□□□ -1.11
CHEK2-220ENST00000454252 SIP14410 1827 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 GSTTP1A0A1W2PQM5 241 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 hCG_1642624A0A1W2PR95 340 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 TMEM221A6NGB7 291 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 M0R296 226 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 PER2O15055 1255 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 PPFIA3O75145 1194 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 CAND2O75155 1236 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 DGKIO75912 1065 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 MMP1P03956 469 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 ITGB5P18084 799 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 SP100P23497 879 aaPredicted RBP8.11□□□□□ -1.11
CHEK2-220ENST00000454252 ICAM3P32942 547 aa8.11□□□□□ -1.11
CHEK2-220ENST00000454252 TCF7P36402 384 aaPredicted RBP8.11□□□□□ -1.11
CHEK2-220ENST00000454252 NRIP1P48552 1158 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms