RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 PIGWQ7Z7B1 504 aa12.25□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 RASGEF1CQ8N431 466 aa12.25□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ZNF317Q96PQ6 595 aaPredicted RBP12.25□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■□□□ 11.9
CHKB-CPT1B-202ENST00000453634 BLOC1S4Q9NUP1 217 aa12.25□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 F8VZ95 297 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 DDX42Q86XP3 938 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 LRRC57Q8N9N7 239 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 LRRC27Q9C0I9 530 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 FAM114A2Q9NRY5 505 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ASAP1Q9ULH1 1129 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 COL4A3BPQ9Y5P4 624 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 COL1A1P02452 1464 aaPredicted RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PPFIA2O75334 1257 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 NEBLO76041 1014 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 IGHMBP2P38935 993 aaKnown RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 MARSP56192 900 aaKnown RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 FKBP3Q00688 224 aaKnown RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 KLHL30Q0D2K2 578 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ZCWPW2Q504Y3 356 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 TOM1L2Q6ZVM7 507 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CCDC26Q8TAB7 109 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 TXLNGYQ9BZA5 131 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ZMYND12Q9H0C1 365 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 SLIT2O94813 1529 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 BAZ2BQ9UIF8 2168 aaKnown RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 TSPY2A6NKD2 308 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CEP104O60308 925 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 GNA14O95837 355 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 FLT3P36888 993 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 POLR2FP61218 127 aaKnown RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 GRB10Q13322 594 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 KRT71Q3SY84 523 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 HIBCHQ6NVY1 386 aaPredicted RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CEP63Q96MT8 703 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PACSIN1Q9BY11 444 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ADAMTS1Q9UHI8 967 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 MAD2L2Q9UI95 211 aa12.24□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 DCDC2CA8MYV0 355 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CCNT1O60563 726 aaKnown RBP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 TECP42680 631 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CHRNDQ07001 517 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PPP2R5AQ15172 486 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PPP1R7Q15435 360 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 LARP4BQ92615 738 aaKnown RBP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 LSM14BQ9BX40 385 aaKnown RBP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CCDC134Q9H6E4 229 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 DCP1AQ9NPI6 582 aaPredicted RBP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 BZW2Q9Y6E2 419 aaKnown RBP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 DAPK3O43293 454 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 GRIK3Q13003 919 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ZNF268Q14587 947 aaPredicted RBP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ASIC2Q16515 512 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 C11orf91Q3C1V1 193 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CCDC152Q4G0S7 254 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 SLFN11Q7Z7L1 901 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 NEK8Q86SG6 692 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 HOOK3Q86VS8 718 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CCDC63Q8NA47 563 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ZNF384Q8TF68 577 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PIGBQ92521 554 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 PGM2Q96G03 612 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 BAIAP2L1Q9UHR4 511 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 MYH7BA7E2Y1 1941 aa12.23□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CCDC88AQ3V6T2 1871 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 KRIT1O00522 736 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 BUB1BO60566 1050 aaPredicted RBP12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 NUDT17P0C025 328 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ALADP13716 330 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 ANXA13P27216 316 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 DHX9Q08211 1270 aaKnown RBP12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 NAA25Q14CX7 972 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 SEPT2Q15019 361 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 HEATR3Q7Z4Q2 680 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 METTL13Q8N6R0 699 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 LMBR1Q8WVP7 490 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 KCNMB3Q9NPA1 279 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 SUCLA2Q9P2R7 463 aaPredicted RBP12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 TTC7AQ9ULT0 858 aaPredicted RBP12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 C15orf41Q9Y2V0 281 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 BACH1O14867 736 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 MMP13P45452 471 aa12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHKB-CPT1B-202ENST00000453634 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms