RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 RNF208Q9H0X6 261 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 BCAS3Q9H6U6 928 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 PKD2L1Q9P0L9 805 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 RCOR1Q9UKL0 485 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 A6NJR5 290 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 ATG7O95352 703 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 HOXD8P13378 290 aaPredicted RBP13.06□□□□□ -0.32
SCN9A-204ENST00000452182 CAPN2P17655 700 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 SFNP31947 248 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
SCN9A-204ENST00000452182 STK38Q15208 465 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 CLEC17AQ6ZS10 378 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 RDM1Q8NG50 284 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 GJA10Q969M2 543 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 AP5M1Q9H0R1 490 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 SPC25Q9HBM1 224 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 XPNPEP3Q9NQH7 507 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 TCEAL9Q9UHQ7 104 aa13.06□□□□□ -0.32
SCN9A-204ENST00000452182 ELP1O95163 1332 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 BRCA2P51587 3418 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 SPTLC2O15270 562 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 CTAGE5O15320 804 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 DYNC1LI2O43237 492 aaPredicted RBP13.05□□□□□ -0.32
SCN9A-204ENST00000452182 ADAMTS4O75173 837 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 CCNE2O96020 404 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 GJB1P08034 283 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
SCN9A-204ENST00000452182 CPT1AP50416 773 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 IL17AQ16552 155 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 HSDL1Q3SXM5 330 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 SEPT1Q8WYJ6 367 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 LENG1Q96BZ8 264 aaPredicted RBP13.05□□□□□ -0.32
SCN9A-204ENST00000452182 UIMC1Q96RL1 719 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 GPR20Q99678 358 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 UNC45AQ9H3U1 944 aa13.05□□□□□ -0.32
SCN9A-204ENST00000452182 SRPRBQ9Y5M8 271 aaKnown RBP13.05□□□□□ -0.32
SCN9A-204ENST00000452182 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 NOP56O00567 594 aaKnown RBP13.04□□□□□ -0.32
SCN9A-204ENST00000452182 PTGS1P23219 599 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 TECP42680 631 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 JAK3P52333 1124 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 ACTR2P61160 394 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 FSCN1Q16658 493 aaKnown RBP13.04□□□□□ -0.32
SCN9A-204ENST00000452182 BRDTQ58F21 947 aaPredicted RBP13.04□□□□□ -0.32
SCN9A-204ENST00000452182 ABHD15Q6UXT9 468 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
SCN9A-204ENST00000452182 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 AFG1LQ8WV93 481 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 LEO1Q8WVC0 666 aaPredicted RBP13.04□□□□□ -0.32
SCN9A-204ENST00000452182 SPATA32Q96LK8 384 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 AK8Q96MA6 479 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 CRISPLD2Q9H0B8 497 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
SCN9A-204ENST00000452182 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
SCN9A-204ENST00000452182 WDR81Q562E7 1941 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 IGKV6D-21A0A0A0MT36 114 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 GSTTP1A0A1W2PQM5 241 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 VWA3AA6NCI4 1184 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 DDX39AO00148 427 aaKnown RBP13.03□□□□□ -0.32
SCN9A-204ENST00000452182 KPNA6O60684 536 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 MMP3P08254 477 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 NCLP19338 710 aaKnown RBP13.03□□□□□ -0.32
SCN9A-204ENST00000452182 LONP1P36776 959 aaKnown RBP13.03□□□□□ -0.32
SCN9A-204ENST00000452182 DGKDQ16760 1214 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
SCN9A-204ENST00000452182 RNF180Q86T96 592 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 ARRDC4Q8NCT1 418 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 DEFB118Q96PH6 123 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
SCN9A-204ENST00000452182 EML1O00423 815 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 SGPL1O95470 568 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 PGK1P00558 417 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 PSAPP07602 524 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.32
SCN9A-204ENST00000452182 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.32
SCN9A-204ENST00000452182 GJA8P48165 433 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 EPHA7Q15375 998 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 MIS18BP1Q6P0N0 1132 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.32
SCN9A-204ENST00000452182 TSEN34Q9BSV6 310 aaKnown RBP13.02□□□□□ -0.32
SCN9A-204ENST00000452182 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 EMSYQ7Z589 1322 aa13.02□□□□□ -0.32
SCN9A-204ENST00000452182 POTEMA6NI47 508 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 CHMP2AO43633 222 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 ZEB2O60315 1214 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 SORBS3O60504 671 aa13.02□□□□□ -0.33
SCN9A-204ENST00000452182 LGR5O75473 907 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms