RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CPLX1O14810 134 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 PRPF3O43395 683 aaKnown RBP11.05□□□□□ -0.64
USP54-207ENST00000451492 PFKMP08237 780 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 ARP10275 920 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 ATP2A2P16615 1042 aaKnown RBP11.05□□□□□ -0.64
USP54-207ENST00000451492 KCNJ6P48051 423 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 CLK2P49760 499 aaKnown RBP11.05□□□□□ -0.64
USP54-207ENST00000451492 IGBP1P78318 339 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 GRIN2CQ14957 1233 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 PKN1Q16512 942 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 TCTN1Q2MV58 587 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 ERICH6BQ5W0A0 696 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 TMCO2Q7Z6W1 182 aaPredicted RBP11.05□□□□□ -0.64
USP54-207ENST00000451492 GIMAP8Q8ND71 665 aaPredicted RBP11.05□□□□□ -0.64
USP54-207ENST00000451492 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
USP54-207ENST00000451492 GLG1Q92896 1179 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 SENP7Q9BQF6 1050 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 AGXT2Q9BYV1 514 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 RNPEPQ9H4A4 650 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 C6orf50Q9HD87 102 aa11.05□□□□□ -0.64
USP54-207ENST00000451492 GSTTP1A0A1W2PQM5 241 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 NBNO60934 754 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 FOSP01100 380 aaPredicted RBP11.04□□□□□ -0.64
USP54-207ENST00000451492 SREBF1P36956 1147 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 SSRP1Q08945 709 aaKnown RBP11.04□□□□□ -0.64
USP54-207ENST00000451492 RAB30Q15771 203 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 NTRK3Q16288 839 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 TRIM71Q2Q1W2 868 aaKnown RBP11.04□□□□□ -0.64
USP54-207ENST00000451492 CEP55Q53EZ4 464 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 REXO1Q8N1G1 1221 aaKnown RBP11.04□□□□□ -0.64
USP54-207ENST00000451492 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 PPM1EQ8WY54 764 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 SEPT1Q8WYJ6 367 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 ZBTB10Q96DT7 871 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 SDF4Q9BRK5 362 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 RNF26Q9BY78 433 aaPredicted RBP11.04□□□□□ -0.64
USP54-207ENST00000451492 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 CERS4Q9HA82 394 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 SLC28A3Q9HAS3 691 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 JPH1Q9HDC5 661 aaPredicted RBP11.04□□□□□ -0.64
USP54-207ENST00000451492 KCNH7Q9NS40 1196 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 SLC9A2Q9UBY0 812 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 EVPLQ92817 2033 aa11.04□□□□□ -0.64
USP54-207ENST00000451492 TMEM265A0A087WTH1 108 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 EPB41L2O43491 1005 aaKnown RBP11.03□□□□□ -0.64
USP54-207ENST00000451492 CA3P07451 260 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 IFNAR1P17181 557 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 NLRP5P59047 1200 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 DEFB103AP81534 67 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 ITGB3BPQ13352 177 aaPredicted RBP11.03□□□□□ -0.64
USP54-207ENST00000451492 GPNMBQ14956 572 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 SERINC5Q86VE9 423 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 TRIM22Q8IYM9 498 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
USP54-207ENST00000451492 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 GAS2L1Q99501 681 aaPredicted RBP11.03□□□□□ -0.64
USP54-207ENST00000451492 ZMYND12Q9H0C1 365 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 GLT8D2Q9H1C3 349 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
USP54-207ENST00000451492 TRPC6Q9Y210 931 aa11.03□□□□□ -0.64
USP54-207ENST00000451492 ESYT2A0FGR8 921 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 RSPH10B2B2RC85 870 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 FAM86B1E9PN63 330 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 FAM86B2P0C5J1 330 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 RSPH10BP0C881 870 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 GNAT1P11488 350 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 IGFBP4P22692 258 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 GNA11P29992 359 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 ACTR2P61160 394 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 WDR5P61964 334 aaKnown RBP11.02□□□□□ -0.65
USP54-207ENST00000451492 RBL2Q08999 1139 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 MBTPS1Q14703 1052 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 GRIK4Q16099 956 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 TRAF7Q6Q0C0 670 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 RUFY4Q6ZNE9 571 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 TRMT1LQ7Z2T5 733 aaKnown RBP11.02□□□□□ -0.65
USP54-207ENST00000451492 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 TRAPPC12Q8WVT3 735 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 SLC9A7Q96T83 725 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 ZBED2Q9BTP6 218 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 TM6SF1Q9BZW5 370 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 AZI2Q9H6S1 392 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 TCEAL9Q9UHQ7 104 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 EMSYQ7Z589 1322 aa11.02□□□□□ -0.65
USP54-207ENST00000451492 KIAA1671Q9BY89 1806 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 BACH1O14867 736 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 MAFGO15525 162 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 TLL1O43897 1013 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 BAIAP3O94812 1187 aa11.01□□□□□ -0.65
USP54-207ENST00000451492 HOXC8P31273 242 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms