RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TXKP42681 527 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 ACLYP53396 1101 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 ATP2C1P98194 919 aaPredicted RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 PURAQ00577 322 aaKnown RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 KRT76Q01546 638 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 CEBPZQ03701 1054 aaKnown RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 SF3A1Q15459 793 aaKnown RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 DGKDQ16760 1214 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 CSPP1Q1MSJ5 1256 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 BRDTQ58F21 947 aaPredicted RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 ZNF746Q6NUN9 644 aaPredicted RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 B3GNT9Q6UX72 402 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 CXCL17Q6UXB2 119 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 ANKLE1Q8NAG6 615 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 SEPT1Q8WYJ6 367 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 FERMT2Q96AC1 680 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 CHAMP1Q96JM3 812 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 USP28Q96RU2 1077 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 TSEN34Q9BSV6 310 aaKnown RBP14.7□□□□□ -0.06
VPS33A-202ENST00000451053 PHF24Q9UPV7 400 aa14.7□□□□□ -0.06
VPS33A-202ENST00000451053 A0A1W2PQ45 241 aaPredicted RBP14.69□□□□□ -0.06
VPS33A-202ENST00000451053 A0A1W2PQY0 241 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 ZEB2O60315 1214 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 ATG7O95352 703 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 LGALS2P05162 132 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 KRT85P78386 507 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 SPIRE1Q08AE8 756 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 PPP2R5CQ13362 524 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 PTPAQ15257 358 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 UTP14CQ5TAP6 766 aaKnown RBP14.69□□□□□ -0.06
VPS33A-202ENST00000451053 ABHD15Q6UXT9 468 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 TRIM50Q86XT4 487 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 PCYT2Q99447 389 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 TTC12Q9H892 705 aaPredicted RBP14.69□□□□□ -0.06
VPS33A-202ENST00000451053 POLR3EQ9NVU0 708 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 TFIP11Q9UBB9 837 aaKnown RBP14.69□□□□□ -0.06
VPS33A-202ENST00000451053 TCEAL9Q9UHQ7 104 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 CFAP45Q9UL16 551 aa14.69□□□□□ -0.06
VPS33A-202ENST00000451053 CENPFP49454 3210 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 MOXD2PA6NHM9 499 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 WDR64B1ANS9 1081 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 EML1O00423 815 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 LAD1O00515 517 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 PPFIA4O75335 1185 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 SUPT20HL2P0C7V6 817 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 COL6A1P12109 1028 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 CAPN2P17655 700 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 PTMSP20962 102 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 PRPHP41219 470 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 DNM1Q05193 864 aaKnown RBP14.68□□□□□ -0.06
VPS33A-202ENST00000451053 IL17AQ16552 155 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 NCAPH2Q6IBW4 605 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 MIER3Q7Z3K6 550 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 SMAP1Q8IYB5 467 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-202ENST00000451053 KAT2BQ92831 832 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 PAWRQ96IZ0 340 aaKnown RBP14.68□□□□□ -0.06
VPS33A-202ENST00000451053 C16orf70Q9BSU1 422 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 MTG1Q9BT17 334 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-202ENST00000451053 DISC1Q9NRI5 854 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 PCDHA12Q9UN75 941 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 SAMM50Q9Y512 469 aa14.68□□□□□ -0.06
VPS33A-202ENST00000451053 KIAA0100Q14667 2235 aaKnown RBP14.68□□□□□ -0.06
VPS33A-202ENST00000451053 POTEMA6NI47 508 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 DDX11L8A8MPP1 907 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 KPNA6O60684 536 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 LGR5O75473 907 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 BMP15O95972 392 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 PSAPP07602 524 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 NCLP19338 710 aaKnown RBP14.67□□□□□ -0.06
VPS33A-202ENST00000451053 SFNP31947 248 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 TECP42680 631 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 NASPP49321 788 aaPredicted RBP14.67□□□□□ -0.06
VPS33A-202ENST00000451053 JAK3P52333 1124 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 PSMC6P62333 389 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 MIS18BP1Q6P0N0 1132 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 UBE2Q1Q7Z7E8 422 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 CCDC60Q8IWA6 550 aaPredicted RBP14.67□□□□□ -0.06
VPS33A-202ENST00000451053 PPP1R13LQ8WUF5 828 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 SENP6Q9GZR1 1112 aaPredicted RBP14.67□□□□□ -0.06
VPS33A-202ENST00000451053 SCAND2PQ9GZW5 306 aaPredicted RBP14.67□□□□□ -0.06
VPS33A-202ENST00000451053 C11orf49Q9H6J7 331 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 CEP131Q9UPN4 1083 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 PCDHA10Q9Y5I2 948 aa14.67□□□□□ -0.06
VPS33A-202ENST00000451053 EMSYQ7Z589 1322 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 IGKV6D-21A0A0A0MT36 114 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 F2P00734 622 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 MARCKSP29966 332 aaPredicted RBP14.66□□□□□ -0.06
VPS33A-202ENST00000451053 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS33A-202ENST00000451053 UGCGQ16739 394 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 TMEM266Q2M3C6 531 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 SWSAP1Q6NVH7 229 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 RDM1Q8NG50 284 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 GLG1Q92896 1179 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 GRIN2DO15399 1336 aa14.66□□□□□ -0.06
VPS33A-202ENST00000451053 VWA3AA6NCI4 1184 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 H3BRB1 525 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 HAS3O00219 553 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 BACH1O14867 736 aa14.65□□□□□ -0.06
VPS33A-202ENST00000451053 CABYRO75952 493 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms