RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MSRAQ9UJ68 235 aa19.44■□□□□ 0.7
PRPF40A-204ENST00000450303 COL6A3P12111 3177 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 TMEM265A0A087WTH1 108 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 SMIM10L2AP0DMW4 78 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 SMIM10L2BP0DMW5 78 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 ACTN1P12814 892 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 MYOGP15173 224 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 SELPP16109 830 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 KCNA2P16389 499 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 MTMR1Q13613 665 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 GPNMBQ14956 572 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 PPP1R18Q6NYC8 613 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 LRRC8DQ7L1W4 858 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 TRIM22Q8IYM9 498 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 AFAP1L1Q8TED9 768 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 INTS4Q96HW7 963 aaKnown RBP19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 EHMT1Q9H9B1 1298 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 JADE2Q9NQC1 790 aa19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 YBX2Q9Y2T7 364 aaKnown RBP19.43■□□□□ 0.7
PRPF40A-204ENST00000450303 MYO9BQ13459 2157 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 C17orf102A2RUQ5 167 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 IFNAR1P17181 557 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 SSRP1Q08945 709 aaKnown RBP19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 PFKFB3Q16875 520 aaPredicted RBP19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 TRIM71Q2Q1W2 868 aaKnown RBP19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 ZNF618Q5T7W0 954 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 CYP2W1Q8TAV3 490 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 ATP6V0A1Q93050 837 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 PHKBQ93100 1093 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 ANO3Q9BYT9 981 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 RNPEPQ9H4A4 650 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 KIF3AQ9Y496 699 aa19.42■□□□□ 0.7
PRPF40A-204ENST00000450303 KAT6AQ92794 2004 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 hCG_1984214I3L0E3 225 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 ADAMTS3O15072 1205 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 TREHO43280 583 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 SCG2P13521 617 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 FOSL2P15408 326 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 ATP2A2P16615 1042 aaKnown RBP19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 TCF7P36402 384 aaPredicted RBP19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 HMGN5P82970 282 aaKnown RBP19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 RAB30Q15771 203 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 JAKMIP3Q5VZ66 844 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 ZNF713Q8N859 430 aaPredicted RBP19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 GIMAP8Q8ND71 665 aaPredicted RBP19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 CDHR1Q96JP9 859 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 MXRA8Q9BRK3 442 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 SETD4Q9NVD3 440 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 SMC3Q9UQE7 1217 aa19.41■□□□□ 0.7
PRPF40A-204ENST00000450303 GSTTP1A0A1W2PQM5 241 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 NBNO60934 754 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 FOSP01100 380 aaPredicted RBP19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 ARP10275 920 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 RBL2Q08999 1139 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 PKN1Q16512 942 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 TCTN1Q2MV58 587 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 TRAF7Q6Q0C0 670 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 WASF1Q92558 559 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 RNF26Q9BY78 433 aaPredicted RBP19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 PRDM12Q9H4Q4 367 aa19.4■□□□□ 0.7
PRPF40A-204ENST00000450303 PRPF3O43395 683 aaKnown RBP19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 THPOP40225 353 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 CLK2P49760 499 aaKnown RBP19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 NTRK3Q16288 839 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 SERINC5Q86VE9 423 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 FAM184AQ8NB25 1140 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 MAFAQ8NHW3 353 aaPredicted RBP19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 SEPT1Q8WYJ6 367 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 SLC26A6Q9BXS9 759 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 SLC28A3Q9HAS3 691 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 KCNH7Q9NS40 1196 aa19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 ZNF215Q9UL58 517 aaPredicted RBP19.39■□□□□ 0.69
PRPF40A-204ENST00000450303 MARK3P27448 753 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 ZNF76P36508 570 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 ST3GAL1Q11201 340 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 PTPRSQ13332 1948 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 MBTPS1Q14703 1052 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 NSUN7Q8NE18 718 aaKnown RBP19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 UIMC1Q96RL1 719 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 STK36Q9NRP7 1315 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 PCDHA11Q9Y5I1 949 aa19.38■□□□□ 0.69
PRPF40A-204ENST00000450303 MAFGO15525 162 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 DEXIO95424 95 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 HOXC8P31273 242 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 SREBF1P36956 1147 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 ARHGAP4P98171 946 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 AP3B2Q13367 1082 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 CEP55Q53EZ4 464 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 TMCO2Q7Z6W1 182 aaPredicted RBP19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 GLG1Q92896 1179 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 GLT8D2Q9H1C3 349 aa19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 ORC3Q9UBD5 711 aaPredicted RBP19.37■□□□□ 0.69
PRPF40A-204ENST00000450303 RSPH10B2B2RC85 870 aa19.36■□□□□ 0.69
PRPF40A-204ENST00000450303 CTDNEP1O95476 244 aa19.36■□□□□ 0.69
PRPF40A-204ENST00000450303 CXCL10P02778 98 aa19.36■□□□□ 0.69
PRPF40A-204ENST00000450303 CTSHP09668 335 aa19.36■□□□□ 0.69
PRPF40A-204ENST00000450303 RSPH10BP0C881 870 aa19.36■□□□□ 0.69
PRPF40A-204ENST00000450303 KCNJ6P48051 423 aa19.36■□□□□ 0.69
PRPF40A-204ENST00000450303 PPP2R2DQ66LE6 453 aa19.36■□□□□ 0.69
PRPF40A-204ENST00000450303 CNKSR3Q6P9H4 555 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms