RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 POTEB3A0JP26 581 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
TNF-208ENST00000449264 ZNF202O95125 648 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 GNRH1P01148 92 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 ELNP15502 786 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 PTGS1P23219 599 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 GJC2Q5T442 439 aaPredicted RBP16.43■□□□□ 0.22
TNF-208ENST00000449264 MFSD14CQ5VZR4 134 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 CCDC62Q6P9F0 684 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 POTEBQ6S5H4 581 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 B3GNT9Q6UX72 402 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
TNF-208ENST00000449264 EIF2AK1Q9BQI3 630 aaKnown RBP16.43■□□□□ 0.22
TNF-208ENST00000449264 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 TELO2Q9Y4R8 837 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 KDM3AQ9Y4C1 1321 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 WDR64B1ANS9 1081 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 MED24O75448 989 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 PLCG1P19174 1290 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 STAT6P42226 847 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 JAK3P52333 1124 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 ZNF746Q6NUN9 644 aaPredicted RBP16.42■□□□□ 0.22
TNF-208ENST00000449264 RGL1Q9NZL6 768 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 TRIM17Q9Y577 477 aa16.42■□□□□ 0.22
TNF-208ENST00000449264 MYH9P35579 1960 aaKnown RBP16.42■□□□□ 0.22
TNF-208ENST00000449264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.41■□□□□ 0.22
TNF-208ENST00000449264 RBM47A0AV96 593 aaKnown RBP16.41■□□□□ 0.22
TNF-208ENST00000449264 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 ACTR2P61160 394 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 GRB10Q13322 594 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 IRF5Q13568 498 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 CTTNQ14247 550 aaKnown RBP16.41■□□□□ 0.22
TNF-208ENST00000449264 RRAGBQ5VZM2 374 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 METTL7BQ6UX53 244 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
TNF-208ENST00000449264 BANK1Q8NDB2 785 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 DYDC2Q96IM9 177 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 PNMA5Q96PV4 448 aa16.41■□□□□ 0.22
TNF-208ENST00000449264 DDX19AQ9NUU7 478 aaKnown RBP16.41■□□□□ 0.22
TNF-208ENST00000449264 NOP56O00567 594 aaKnown RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 ADCY3O60266 1144 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 ZNF865P0CJ78 1059 aaPredicted RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 SMPD1P17405 629 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 SFNP31947 248 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 TRIM32Q13049 653 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 EPHA7Q15375 998 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 CAMK4Q16566 473 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 ECM1Q16610 540 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 LONRF3Q496Y0 759 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 CATSPER3Q86XQ3 398 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 SMAP1Q8IYB5 467 aaPredicted RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 TRMT44Q8IYL2 757 aaKnown RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 IQUBQ8NA54 791 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 PYM1Q9BRP8 204 aaKnown RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 LXNQ9BS40 222 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 TMEM63CQ9P1W3 806 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 SERTAD1Q9UHV2 236 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 ADCY6O43306 1168 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 GH1P01241 217 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 IGHA2P01877 340 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 SPATA31C1P0DKV0 1188 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 RPA1P27694 616 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 TNFAIP2Q03169 654 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 E2F4Q16254 413 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 SYAP1Q96A49 352 aaPredicted RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 LENG1Q96BZ8 264 aaPredicted RBP16.4■□□□□ 0.22
TNF-208ENST00000449264 SPATA33Q96N06 139 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 NT5C3AQ9H0P0 336 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 PCDHA10Q9Y5I2 948 aa16.4■□□□□ 0.22
TNF-208ENST00000449264 BACH1O14867 736 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
TNF-208ENST00000449264 ARHGAP1Q07960 439 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 DUSP28Q4G0W2 176 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 TMEM119Q4V9L6 283 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 IQSEC1Q6DN90 963 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 MIS18BP1Q6P0N0 1132 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 TRPV1Q8NER1 839 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 RDM1Q8NG50 284 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 NEK9Q8TD19 979 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 LRRC15Q8TF66 581 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
TNF-208ENST00000449264 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
TNF-208ENST00000449264 CLSTN2Q9H4D0 955 aa16.39■□□□□ 0.21
TNF-208ENST00000449264 A0A087WWV3 80 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 SLITRK3O94933 977 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 HMGCRP04035 888 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 PSAPP07602 524 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 SUPT20HL2P0C7V6 817 aa16.38■□□□□ 0.21
TNF-208ENST00000449264 CYBAP13498 195 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms