RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 LMNTD2Q8IXW0 634 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 HEXIM2Q96MH2 286 aaKnown RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 SLC8A2Q9UPR5 921 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 PCDHB6Q9Y5E3 794 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 CASQ2O14958 399 aaPredicted RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 PCK1P35558 622 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 TMTC3Q6ZXV5 915 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 RMDN3Q96TC7 470 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 FAM49AQ9H0Q0 323 aaPredicted RBP11.05□□□□□ -0.64
SCN10A-201ENST00000449082 RNF181Q9P0P0 153 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 KLHL14Q9P2G3 628 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 A2ML1A8K2U0 1454 aa11.05□□□□□ -0.64
SCN10A-201ENST00000449082 EFCAB8A8MWE9 144 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 USP17L10C9JJH3 530 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 MYCP01106 439 aaPredicted RBP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 NAA35Q5VZE5 725 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 UTYO14607 1347 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 KRT1P04264 644 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 INHBAP08476 426 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PRDX5P30044 214 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 LRRC63Q05C16 580 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 RBL2Q08999 1139 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 MAP3K21Q5TCX8 1036 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 RCSD1Q6JBY9 416 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 EFCAB13Q8IY85 973 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 RABEP2Q9H5N1 569 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 MROH7-TTC4A0A0A0MT08 1334 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 GFPT2O94808 682 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 CUL4AQ13619 759 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 NECTIN1Q15223 517 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 RAB44Q7Z6P3 723 aaPredicted RBP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PHLDB2Q86SQ0 1253 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 ATP6V0A4Q9HBG4 840 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 ABCB11O95342 1321 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 HOXD10P28358 340 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PDE1BQ01064 536 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 TNFAIP2Q03169 654 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PPP1R18Q6NYC8 613 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 GRAMD1CQ8IYS0 662 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 RAVER2Q9HCJ3 691 aaKnown RBP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PTPN22Q9Y2R2 807 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 KRT3P12035 628 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 ACTN1P12814 892 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 CDC25AP30304 524 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 TSTA3Q13630 321 aaPredicted RBP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 SNRNP48Q6IEG0 339 aaKnown RBP11.04□□□□□ -0.64
SCN10A-201ENST00000449082 KCTD6Q8NC69 237 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PAGE5Q96GU1 130 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 FAM114A2Q9NRY5 505 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
SCN10A-201ENST00000449082 PRPSAP2O60256 369 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CYP2E1P05181 493 aaPredicted RBP11.03□□□□□ -0.64
SCN10A-201ENST00000449082 IGKV5-2P06315 115 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CD58P19256 250 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 PEX3P56589 373 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 RBBP5Q15291 538 aaKnown RBP11.03□□□□□ -0.64
SCN10A-201ENST00000449082 MCPH1Q8NEM0 835 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
SCN10A-201ENST00000449082 HDAC11Q96DB2 347 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 BHMT2Q9H2M3 363 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CPDO75976 1380 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CYP2D6P10635 497 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 PRELPP51888 382 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 DPCR1Q3MIW9 517 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 RAPH1Q70E73 1250 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 TMEM47Q9BQJ4 181 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 ANGPTL3Q9Y5C1 460 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CRB1P82279 1406 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 UBN2Q6ZU65 1347 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CIITAP33076 1130 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 NFX1Q12986 1120 aaKnown RBP11.03□□□□□ -0.64
SCN10A-201ENST00000449082 ARL13BQ3SXY8 428 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 SGO2Q562F6 1265 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 THEM5Q8N1Q8 247 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 JRKLQ9Y4A0 524 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 SERPING1P05155 500 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 TXNRD1Q16881 649 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 ENOX1Q8TC92 643 aaKnown RBP11.03□□□□□ -0.64
SCN10A-201ENST00000449082 WDR64B1ANS9 1081 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CSPG5O95196 566 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 APBA1Q02410 837 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 ARHGEF18Q6ZSZ5 1173 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 MICAL1Q8TDZ2 1067 aa11.03□□□□□ -0.64
SCN10A-201ENST00000449082 CPP00450 1065 aa11.02□□□□□ -0.64
SCN10A-201ENST00000449082 GUCY2DQ02846 1103 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms