RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 GNAT1P11488 350 aa32.49■■■□□ 2.79
CBX4-202ENST00000448310 KCNA2P16389 499 aa32.49■■■□□ 2.79
CBX4-202ENST00000448310 ITGB5P18084 799 aa32.49■■■□□ 2.79
CBX4-202ENST00000448310 LMBR1Q8WVP7 490 aa32.49■■■□□ 2.79
CBX4-202ENST00000448310 GPRASP2Q96D09 838 aa32.49■■■□□ 2.79
CBX4-202ENST00000448310 TGS1Q96RS0 853 aaKnown RBP32.49■■■□□ 2.79
CBX4-202ENST00000448310 SUGCTQ9HAC7 445 aa32.49■■■□□ 2.79
CBX4-202ENST00000448310 BDP1A6H8Y1 2624 aa32.49■■■□□ 2.79
CBX4-202ENST00000448310 BRWD1Q9NSI6 2320 aa32.48■■■□□ 2.79
CBX4-202ENST00000448310 TCF7P36402 384 aaPredicted RBP32.48■■■□□ 2.79
CBX4-202ENST00000448310 ERVK-21P61565 698 aa32.48■■■□□ 2.79
CBX4-202ENST00000448310 HEATR3Q7Z4Q2 680 aa32.48■■■□□ 2.79
CBX4-202ENST00000448310 ADAM17P78536 824 aa32.47■■■□□ 2.79
CBX4-202ENST00000448310 AAK1Q2M2I8 961 aa32.47■■■□□ 2.79
CBX4-202ENST00000448310 SGMS1Q86VZ5 419 aa32.47■■■□□ 2.79
CBX4-202ENST00000448310 GIMAP8Q8ND71 665 aaPredicted RBP32.47■■■□□ 2.79
CBX4-202ENST00000448310 SEPT8Q92599 483 aa32.47■■■□□ 2.79
CBX4-202ENST00000448310 TCEANC2Q96MN5 208 aa32.47■■■□□ 2.79
CBX4-202ENST00000448310 SPDYE3A6NKU9 549 aa32.46■■■□□ 2.79
CBX4-202ENST00000448310 CAND2O75155 1236 aa32.46■■■□□ 2.79
CBX4-202ENST00000448310 PCDHA6Q9UN73 950 aa32.46■■■□□ 2.79
CBX4-202ENST00000448310 INSL6Q9Y581 213 aa32.46■■■□□ 2.79
CBX4-202ENST00000448310 PCDHA8Q9Y5H6 950 aa32.46■■■□□ 2.79
CBX4-202ENST00000448310 UBIAD1Q9Y5Z9 338 aa32.46■■■□□ 2.79
CBX4-202ENST00000448310 BMP2KLQ5H9B9 411 aa32.45■■■□□ 2.79
CBX4-202ENST00000448310 CDHR1Q96JP9 859 aa32.45■■■□□ 2.79
CBX4-202ENST00000448310 C17orf80Q9BSJ5 609 aa32.45■■■□□ 2.79
CBX4-202ENST00000448310 COG5Q9UP83 839 aa32.45■■■□□ 2.79
CBX4-202ENST00000448310 GSTTP1A0A1W2PQM5 241 aa32.44■■■□□ 2.78
CBX4-202ENST00000448310 MARK3P27448 753 aa32.44■■■□□ 2.78
CBX4-202ENST00000448310 MTMR1Q13613 665 aa32.44■■■□□ 2.78
CBX4-202ENST00000448310 APOA5Q6Q788 366 aa32.44■■■□□ 2.78
CBX4-202ENST00000448310 CNTNAP5Q8WYK1 1306 aa32.44■■■□□ 2.78
CBX4-202ENST00000448310 HTRA4P83105 476 aaPredicted RBP32.43■■■□□ 2.78
CBX4-202ENST00000448310 RNF20Q5VTR2 975 aa32.43■■■□□ 2.78
CBX4-202ENST00000448310 WWC2Q6AWC2 1192 aa32.43■■■□□ 2.78
CBX4-202ENST00000448310 SYNE3Q6ZMZ3 975 aa32.43■■■□□ 2.78
CBX4-202ENST00000448310 RUFY4Q6ZNE9 571 aa32.43■■■□□ 2.78
CBX4-202ENST00000448310 SEPT1Q8WYJ6 367 aa32.43■■■□□ 2.78
CBX4-202ENST00000448310 NEK1Q96PY6 1258 aa32.43■■■□□ 2.78
CBX4-202ENST00000448310 NRCAMQ92823 1304 aa32.43■■■□□ 2.78
CBX4-202ENST00000448310 NLRC5Q86WI3 1866 aa32.42■■■□□ 2.78
CBX4-202ENST00000448310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP32.42■■■□□ 2.78
CBX4-202ENST00000448310 UPP2O95045 317 aa32.42■■■□□ 2.78
CBX4-202ENST00000448310 TYW1BQ6NUM6 668 aa32.42■■■□□ 2.78
CBX4-202ENST00000448310 HLA-CQ95604 372 aa32.42■■■□□ 2.78
CBX4-202ENST00000448310 JADE2Q9NQC1 790 aa32.42■■■□□ 2.78
CBX4-202ENST00000448310 LMCD1Q9NZU5 365 aa32.42■■■□□ 2.78
CBX4-202ENST00000448310 BRPF3Q9ULD4 1205 aa32.42■■■□□ 2.78
CBX4-202ENST00000448310 PPFIA1Q13136 1202 aa32.41■■■□□ 2.78
CBX4-202ENST00000448310 FAM26DQ5JW98 314 aa32.41■■■□□ 2.78
CBX4-202ENST00000448310 PGBD1Q96JS3 809 aa32.41■■■□□ 2.78
CBX4-202ENST00000448310 CHRNA1P02708 482 aa32.4■■■□□ 2.78
CBX4-202ENST00000448310 EXOSC10Q01780 885 aaKnown RBP32.4■■■□□ 2.78
CBX4-202ENST00000448310 ADCK5Q3MIX3 580 aa32.4■■■□□ 2.78
CBX4-202ENST00000448310 RASEFQ8IZ41 740 aa32.4■■■□□ 2.78
CBX4-202ENST00000448310 FBXO22Q8NEZ5 403 aa32.4■■■□□ 2.78
CBX4-202ENST00000448310 SP7Q8TDD2 431 aaPredicted RBP32.4■■■□□ 2.78
CBX4-202ENST00000448310 GLG1Q92896 1179 aa32.4■■■□□ 2.78
CBX4-202ENST00000448310 TOP1MTQ969P6 601 aa32.4■■■□□ 2.78
CBX4-202ENST00000448310 IFIH1Q9BYX4 1025 aaKnown RBP32.4■■■□□ 2.78
CBX4-202ENST00000448310 ERAP1Q9NZ08 941 aa32.4■■■□□ 2.78
CBX4-202ENST00000448310 NAPAP54920 295 aa32.39■■■□□ 2.78
CBX4-202ENST00000448310 GRIK4Q16099 956 aa32.39■■■□□ 2.78
CBX4-202ENST00000448310 RTN1Q16799 776 aa32.39■■■□□ 2.78
CBX4-202ENST00000448310 YME1L1Q96TA2 773 aa32.39■■■□□ 2.78
CBX4-202ENST00000448310 RBM28Q9NW13 759 aaKnown RBP32.39■■■□□ 2.78
CBX4-202ENST00000448310 CENPQQ7L2Z9 268 aaPredicted RBP32.38■■■□□ 2.77
CBX4-202ENST00000448310 DHX32Q7L7V1 743 aaKnown RBP32.38■■■□□ 2.77
CBX4-202ENST00000448310 CYP2W1Q8TAV3 490 aa32.38■■■□□ 2.77
CBX4-202ENST00000448310 EHMT1Q9H9B1 1298 aa32.38■■■□□ 2.77
CBX4-202ENST00000448310 ZBTB43O43298 467 aa32.37■■■□□ 2.77
CBX4-202ENST00000448310 GHRP10912 638 aa32.37■■■□□ 2.77
CBX4-202ENST00000448310 FUT2Q10981 343 aa32.37■■■□□ 2.77
CBX4-202ENST00000448310 APBB2Q92870 758 aa32.37■■■□□ 2.77
CBX4-202ENST00000448310 ZBTB10Q96DT7 871 aa32.37■■■□□ 2.77
CBX4-202ENST00000448310 SMARCAD1Q9H4L7 1026 aa32.37■■■□□ 2.77
CBX4-202ENST00000448310 TUBE1Q9UJT0 475 aa32.37■■■□□ 2.77
CBX4-202ENST00000448310 IGBP1P78318 339 aa32.36■■■□□ 2.77
CBX4-202ENST00000448310 TAF2Q6P1X5 1199 aa32.36■■■□□ 2.77
CBX4-202ENST00000448310 PCYT2Q99447 389 aa32.36■■■□□ 2.77
CBX4-202ENST00000448310 MXRA8Q9BRK3 442 aa32.36■■■□□ 2.77
CBX4-202ENST00000448310 JPH1Q9HDC5 661 aaPredicted RBP32.36■■■□□ 2.77
CBX4-202ENST00000448310 RIC8AQ9NPQ8 531 aa32.36■■■□□ 2.77
CBX4-202ENST00000448310 KCNH7Q9NS40 1196 aa32.36■■■□□ 2.77
CBX4-202ENST00000448310 V9GY48 417 aaPredicted RBP32.36■■■□□ 2.77
CBX4-202ENST00000448310 MAFGO15525 162 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 MGAT3Q09327 533 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 EPC2Q52LR7 807 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 MARCH8Q5T0T0 291 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 RPAINQ86UA6 219 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 DNAJB3Q8WWF6 145 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 SLC9A2Q9UBY0 812 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 LOXHD1Q8IVV2 1947 aa32.35■■■□□ 2.77
CBX4-202ENST00000448310 KLF18A0A0U1RQI7 1052 aa32.34■■■□□ 2.77
CBX4-202ENST00000448310 GOLGA8AA7E2F4 631 aa32.34■■■□□ 2.77
CBX4-202ENST00000448310 GOLGA8BA8MQT2 603 aa32.34■■■□□ 2.77
CBX4-202ENST00000448310 ADCY7P51828 1080 aa32.34■■■□□ 2.77
CBX4-202ENST00000448310 TMEM260Q9NX78 707 aa32.34■■■□□ 2.77
CBX4-202ENST00000448310 RALGAPA2Q2PPJ7 1873 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms