RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 FMN2Q9NZ56 1722 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 ADGRL3Q9HAR2 1447 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 KRT2P35908 639 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 AP2B1P63010 937 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 FMR1Q06787 632 aaKnown RBP eCLIP9.96□□□□□ -0.811e-6■■■■□ 21.4
SMC6-207ENST00000448223 TRMT10CQ7L0Y3 403 aaKnown RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 RRAGAQ7L523 313 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 SYT2Q8N9I0 419 aaPredicted RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 FANCBQ8NB91 859 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 SPDYE1Q8NFV5 336 aaPredicted RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 ENOX1Q8TC92 643 aaKnown RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 GPKOWQ92917 476 aaPredicted RBP eCLIP9.96□□□□□ -0.81
SMC6-207ENST00000448223 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 ATP8A1Q9Y2Q0 1164 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 MAD1L1Q9Y6D9 718 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 ADD2P35612 726 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 DYNLL1P63167 89 aaKnown RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 GRK7Q8WTQ7 553 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 SYMPKQ92797 1274 aaKnown RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 POLE3Q9NRF9 147 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 HAUS2Q9NVX0 235 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 MCM9Q9NXL9 1143 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 STMN3Q9NZ72 180 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 COPG1Q9Y678 874 aaKnown RBP9.96□□□□□ -0.81
SMC6-207ENST00000448223 TNKSO95271 1327 aa9.96□□□□□ -0.81
SMC6-207ENST00000448223 TSPAN9O75954 239 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 PDE8BO95263 885 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 GNAT1P11488 350 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 GGCXP38435 758 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 CTSWP56202 376 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 ANKRD2Q9GZV1 360 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 CNNM2Q9H8M5 875 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 ETNK1Q9HBU6 452 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 PCDH11XQ9BZA7 1347 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 PCDH11YQ9BZA8 1340 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 USP17L12C9JPN9 530 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 USP17L21D6R901 530 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 SH2B2O14492 632 aaPredicted RBP9.96□□□□□ -0.82
SMC6-207ENST00000448223 DEXIO95424 95 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 MMEP08473 750 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 ST13P50502 369 aaKnown RBP9.96□□□□□ -0.82
SMC6-207ENST00000448223 DHX9Q08211 1270 aaKnown RBP9.96□□□□□ -0.82
SMC6-207ENST00000448223 PDE4DQ08499 809 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 PUM3Q15397 648 aaKnown RBP9.96□□□□□ -0.82
SMC6-207ENST00000448223 MCF2L2Q86YR7 1114 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 OGFOD1Q8N543 542 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 ANKRD13CQ8N6S4 541 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 ICA1LQ8NDH6 482 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 RFWD2Q8NHY2 731 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 TRAIPQ9BWF2 469 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 DLGAP2Q9P1A6 1054 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 TEKT2Q9UIF3 430 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 HPS5Q9UPZ3 1129 aa9.96□□□□□ -0.82
SMC6-207ENST00000448223 TMA7Q9Y2S6 64 aaKnown RBP9.96□□□□□ -0.82
SMC6-207ENST00000448223 CAPN1P07384 714 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 RASGRF1Q13972 1273 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 VSTM4Q8IW00 320 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 GABPB2Q8TAK5 448 aaPredicted RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 TMEM60Q9H2L4 133 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 KAT14Q9H8E8 782 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 ECT2Q9H8V3 914 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 MCM8Q9UJA3 840 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 A0A1B0GW55 424 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 RASGRF2O14827 1237 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DUX4L2P0CJ85 424 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DUX4L3P0CJ86 424 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DUX4L4P0CJ87 422 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DUX4L5P0CJ88 424 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DUX4L6P0CJ89 424 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DUX4L7P0CJ90 424 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 CARSP49589 748 aaKnown RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 PTGDRQ13258 359 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 CNNM4Q6P4Q7 775 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 HIPK4Q8NE63 616 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 ZNF483Q8TF39 744 aaPredicted RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 EHMT1Q9H9B1 1298 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 GID8Q9NWU2 228 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DUX4Q9UBX2 424 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 TFR2Q9UP52 801 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 SETD1AO15047 1707 aaKnown RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 RGPD1P0DJD0 1748 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 SMIM22K7EJ46 135 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 GNGT2O14610 69 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 BUB1O43683 1085 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 BEND6Q5SZJ8 279 aaPredicted RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 CRACR2BQ8N4Y2 399 aaPredicted RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 ZBTB38Q8NAP3 1195 aaPredicted RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 PITPNM3Q9BZ71 974 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 SUGCTQ9HAC7 445 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 SAP30BPQ9UHR5 308 aaKnown RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 NMT2O60551 498 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 GPC4O75487 556 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 GOLGA8HP0CJ92 632 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 CCND1P24385 295 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 ST5P78524 1137 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms