RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CDK7P50613 346 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 TLE2Q04725 743 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 NBR1Q14596 966 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
LINC00408-201ENST00000447784 TMEM266Q2M3C6 531 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 CELF3Q5SZQ8 465 aaKnown RBP13.08□□□□□ -0.32
LINC00408-201ENST00000447784 LRCH2Q5VUJ6 765 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 SPATA33Q96N06 139 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 SEZ6LQ9BYH1 1024 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 JPH1Q9HDC5 661 aaPredicted RBP13.08□□□□□ -0.32
LINC00408-201ENST00000447784 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.08□□□□□ -0.32
LINC00408-201ENST00000447784 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.32
LINC00408-201ENST00000447784 MROH7Q68CQ1 1323 aa13.08□□□□□ -0.32
LINC00408-201ENST00000447784 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
LINC00408-201ENST00000447784 DDX39AO00148 427 aaKnown RBP13.07□□□□□ -0.32
LINC00408-201ENST00000447784 ARVCFO00192 962 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 EDIL3O43854 480 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 ATP9AO75110 1047 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 KCNA2P16389 499 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 TXKP42681 527 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 CPT1AP50416 773 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 BEX3Q00994 111 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 SP2Q02086 613 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 SP4Q02446 784 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
LINC00408-201ENST00000447784 PTGDRQ13258 359 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 SEMA3FQ13275 785 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 TMEM63BQ5T3F8 832 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 METTL7BQ6UX53 244 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 COPS5Q92905 334 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 SLC5A5Q92911 643 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 LENG9Q96B70 501 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
LINC00408-201ENST00000447784 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 SLC9A2Q9UBY0 812 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 NFASCO94856 1347 aa13.07□□□□□ -0.32
LINC00408-201ENST00000447784 DCDC2CA8MYV0 355 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 CLTBP09497 229 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00408-201ENST00000447784 KRT76Q01546 638 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
LINC00408-201ENST00000447784 STK38Q15208 465 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 CXCL17Q6UXB2 119 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 ETNPPLQ8TBG4 499 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 AFG1LQ8WV93 481 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
LINC00408-201ENST00000447784 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 TTC12Q9H892 705 aaPredicted RBP13.06□□□□□ -0.32
LINC00408-201ENST00000447784 KCNMB3Q9NPA1 279 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 POLR3EQ9NVU0 708 aa13.06□□□□□ -0.32
LINC00408-201ENST00000447784 TFIP11Q9UBB9 837 aaKnown RBP13.06□□□□□ -0.32
LINC00408-201ENST00000447784 TRIM43BA6NCK2 446 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 A6NJR5 290 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 WNT7AO00755 349 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 KIAA0355O15063 1070 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 CHMP2AO43633 222 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 KPNA6O60684 536 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 PQBP1O60828 265 aaKnown RBP13.05□□□□□ -0.32
LINC00408-201ENST00000447784 PTGS1P23219 599 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 JAK3P52333 1124 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 KRT85P78386 507 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 MDM2Q00987 491 aaPredicted RBP13.05□□□□□ -0.32
LINC00408-201ENST00000447784 DNM1Q05193 864 aaKnown RBP13.05□□□□□ -0.32
LINC00408-201ENST00000447784 ARHGAP1Q07960 439 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 FAAP100Q0VG06 881 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 ZNF746Q6NUN9 644 aaPredicted RBP13.05□□□□□ -0.32
LINC00408-201ENST00000447784 MIS18BP1Q6P0N0 1132 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 SEPT1Q8WYJ6 367 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 HAS1Q92839 578 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 GJA10Q969M2 543 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 TRIM43Q96BQ3 446 aaPredicted RBP13.05□□□□□ -0.32
LINC00408-201ENST00000447784 MTMR9Q96QG7 549 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 USP28Q96RU2 1077 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 UBE2OQ9C0C9 1292 aaKnown RBP13.05□□□□□ -0.32
LINC00408-201ENST00000447784 AZI2Q9H6S1 392 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 PRDM5Q9NQX1 630 aaPredicted RBP13.05□□□□□ -0.32
LINC00408-201ENST00000447784 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 ALPK3Q96L96 1907 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 LRRC37A2A6NM11 1700 aa13.05□□□□□ -0.32
LINC00408-201ENST00000447784 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 BACH1O14867 736 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 PPFIA4O75335 1185 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 PSMD10O75832 226 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 SFNP31947 248 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 PRPHP41219 470 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 TECP42680 631 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 ACTR2P61160 394 aa13.04□□□□□ -0.32
LINC00408-201ENST00000447784 ATP2C1P98194 919 aaPredicted RBP13.04□□□□□ -0.32
LINC00408-201ENST00000447784 PURAQ00577 322 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms