RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 FMR1Q06787 632 aaKnown RBP eCLIP8.4□□□□□ -1.069e-6■■■■□ 20.6
TRIM4-204ENST00000447480 DPYDQ12882 1025 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 PICALMQ13492 652 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 RASA3Q14644 834 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 KCNB1Q14721 858 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 ARL6IP4Q66PJ3 421 aaKnown RBP8.4□□□□□ -1.06
TRIM4-204ENST00000447480 KDM7AQ6ZMT4 941 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 LIAT1Q6ZQX7 453 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 IFNL3Q8IZI9 196 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 LCORLQ8N3X6 602 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 TRPM4Q8TD43 1214 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 BCAS4Q8TDM0 211 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 IGDCC4Q8TDY8 1250 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 ZNF526Q8TF50 670 aaPredicted RBP8.4□□□□□ -1.06
TRIM4-204ENST00000447480 DRC1Q96MC2 740 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 RUFY1Q96T51 708 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 RHOXF2Q9BQY4 288 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 RNF26Q9BY78 433 aaPredicted RBP8.4□□□□□ -1.06
TRIM4-204ENST00000447480 NUCKS1Q9H1E3 243 aaKnown RBP8.4□□□□□ -1.06
TRIM4-204ENST00000447480 EPN3Q9H201 632 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 EPC1Q9H2F5 836 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 CUEDC2Q9H467 287 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 MKNK2Q9HBH9 465 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 DCP1AQ9NPI6 582 aaPredicted RBP8.4□□□□□ -1.06
TRIM4-204ENST00000447480 BATF3Q9NR55 127 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 SERTAD1Q9UHV2 236 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 ANAPC4Q9UJX5 808 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 CSADQ9Y600 493 aa8.4□□□□□ -1.06
TRIM4-204ENST00000447480 PAPPA2Q9BXP8 1791 aa8.4□□□□□ -1.07
TRIM4-204ENST00000447480 ROBO3Q96MS0 1386 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 CLRN2A0PK11 232 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 ERICH2A1L162 156 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 HMGB1P1B2RPK0 211 aaPredicted RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 TCP10L2B9ZVM9 353 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 N4BP1O75113 896 aaKnown RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 TACC1O75410 805 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 ASNSP08243 561 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 CALM1P0DP23 149 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 CALM2P0DP24 149 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 CALM3P0DP25 149 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 KRT9P35527 623 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 PAFAH1B1P43034 410 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 FNTAP49354 379 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 MMP16P51512 607 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 CDR1P51861 262 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 VAV2P52735 878 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 MRPL12P52815 198 aaKnown RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 COPB1P53618 953 aaKnown RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 GYS2P54840 703 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 ZBED6P86452 979 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 CRYMQ14894 314 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 COBLL1Q53SF7 1204 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 TCP11X2Q5H9J9 407 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 SPDYCQ5MJ68 293 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 WLSQ5T9L3 541 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 ZNF658Q5TYW1 1059 aaPredicted RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 LRIG3Q6UXM1 1119 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 MFSD6Q6ZSS7 791 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 IQCA1Q86XH1 822 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 FMNL3Q8IVF7 1028 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 MAPKAPK5Q8IW41 473 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 IFT20Q8IY31 132 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 ZNF444Q8N0Y2 327 aaPredicted RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 ZNF784Q8NCA9 323 aaPredicted RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 ESR2Q92731 530 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 PAGE5Q96GU1 130 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 DHTKD1Q96HY7 919 aaPredicted RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 NUP88Q99567 741 aaPredicted RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 DESI2Q9BSY9 194 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 SELENOOQ9BVL4 669 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 AS3MTQ9HBK9 375 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 NMRK2Q9NPI5 230 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 LUC7LQ9NQ29 371 aaKnown RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 SAMSN1Q9NSI8 373 aaKnown RBP8.39□□□□□ -1.07
TRIM4-204ENST00000447480 SYNPO2Q9UMS6 1093 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 SLC12A7Q9Y666 1083 aa8.39□□□□□ -1.07
TRIM4-204ENST00000447480 DDX60LQ5H9U9 1706 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 A0A087WWV3 80 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 GRID2IPA4D2P6 1211 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 GOLGA8AA7E2F4 631 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 LGALS16A8MUM7 142 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 GSG1L2A8MUP6 293 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 M0R2C6 588 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 AGPSO00116 658 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 TEX33O43247 280 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 CTNND1O60716 968 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 LCA5LO95447 670 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 FGFR1OPO95684 399 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 CDC27P30260 824 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 DYNLL1P63167 89 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 AKAP17AQ02040 695 aaKnown RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 PPARAQ07869 468 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 KIF5AQ12840 1032 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 PAK1Q13153 545 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 KRT31Q15323 416 aa8.38□□□□□ -1.07
TRIM4-204ENST00000447480 PREPLQ4J6C6 727 aaPredicted RBP8.38□□□□□ -1.07
TRIM4-204ENST00000447480 CCDC122Q5T0U0 273 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms