RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 HOMER1Q86YM7 354 aa8.68□□□□□ -1.02
ATP13A3-204ENST00000446356 SYNPOQ8N3V7 929 aa8.68□□□□□ -1.02
ATP13A3-204ENST00000446356 CISD2Q8N5K1 135 aaKnown RBP8.68□□□□□ -1.02
ATP13A3-204ENST00000446356 ZSWIM3Q96MP5 696 aa8.68□□□□□ -1.02
ATP13A3-204ENST00000446356 USP40Q9NVE5 1235 aa8.68□□□□□ -1.02
ATP13A3-204ENST00000446356 RIC8BQ9NVN3 520 aa8.68□□□□□ -1.02
ATP13A3-204ENST00000446356 SPATA6Q9NWH7 488 aaPredicted RBP8.68□□□□□ -1.02
ATP13A3-204ENST00000446356 GJA9P57773 515 aa8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 ADAM9Q13443 819 aa8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 BTBD8Q5XKL5 378 aa8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 OSTM1Q86WC4 334 aa8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 CELF4Q9BZC1 486 aaKnown RBP8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 PDGFDQ9GZP0 370 aaPredicted RBP8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 RAPGEFL1Q9UHV5 662 aa8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 COQ6Q9Y2Z9 468 aa8.67□□□□□ -1.02
ATP13A3-204ENST00000446356 TCRBV16S1A1N1A0A5B0 115 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 B4E1Z4 1266 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 NPTXRO95502 500 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 ASMTLO95671 621 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 PTPN1P18031 435 aaKnown RBP8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 RANGAP1P46060 587 aaPredicted RBP8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 JAM2P57087 298 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 FGD2Q7Z6J4 655 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 SH3RF2Q8TEC5 729 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 SCLYQ96I15 445 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 TRIM39Q9HCM9 518 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 DLL4Q9NR61 685 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 CROTQ9UKG9 612 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 TELO2Q9Y4R8 837 aa8.66□□□□□ -1.02
ATP13A3-204ENST00000446356 TCRBV5S4A2TA0A5A2 114 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 ESYT3A0FGR9 886 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 ZNF561-AS1K7EIQ3 104 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 MAN2B1O00754 1011 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 ENO2P09104 434 aaPredicted RBP8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 CD276Q5ZPR3 534 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 TTLL10Q6ZVT0 673 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 DDX53Q86TM3 631 aaKnown RBP8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 FEZF2Q8TBJ5 459 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 APPBP2Q92624 585 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 KANSL2Q9H9L4 492 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 L2HGDHQ9H9P8 463 aa8.65□□□□□ -1.02
ATP13A3-204ENST00000446356 FBXO21O94952 628 aa8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 AMY2AP04746 511 aa8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 AMY2BP19961 511 aa8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 IGFALSP35858 605 aa8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 LACTBP83111 547 aaPredicted RBP8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 TCEA2Q15560 299 aa8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 NT5DC1Q5TFE4 455 aa8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 ADAMTS17Q8TE56 1095 aa8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 RNPC3Q96LT9 517 aaKnown RBP8.64□□□□□ -1.03
ATP13A3-204ENST00000446356 PRAMEF25A6NGN4 478 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 OPA1O60313 960 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 CKMP06732 381 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 FLT3P36888 993 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 FAM26FQ5R3K3 315 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 HHIPL2Q6UWX4 724 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 FAM124AQ86V42 546 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 ZDHHC14Q8IZN3 488 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 IGSF22Q8N9C0 903 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 DTX3Q8N9I9 347 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 SMURF1Q9HCE7 757 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 ARHGAP28Q9P2N2 729 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 RBPJLQ9UBG7 517 aa8.63□□□□□ -1.03
ATP13A3-204ENST00000446356 OTOL1A6NHN0 477 aaPredicted RBP8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 DDX3XO00571 662 aaKnown RBP eCLIP8.62□□□□□ -1.038e-18■□□□□ 9.5
ATP13A3-204ENST00000446356 PPP1R12AO14974 1030 aaPredicted RBP8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 CLASP2O75122 1294 aaKnown RBP8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 HIP1RO75146 1068 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 ASLP04424 464 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 CYP1A1P04798 512 aaPredicted RBP8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 HOXA5P20719 270 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 SKIDA1Q1XH10 827 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 TMEM177Q53S58 311 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 TRMT10BQ6PF06 316 aaKnown RBP8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 ZNF761Q86XN6 746 aaPredicted RBP8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 C2orf69Q8N8R5 385 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 XYLT2Q9H1B5 865 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 FANCLQ9NW38 375 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 ARHGAP20Q9P2F6 1191 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 FTSJ1Q9UET6 329 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 ADAMTS20P59510 1910 aa8.62□□□□□ -1.03
ATP13A3-204ENST00000446356 SLC12A8A0AV02 714 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 ACOT7O00154 380 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 KCNK3O14649 394 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 CDC45O75419 566 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 CTSWP56202 376 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 PFKPQ01813 784 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 RGL3Q3MIN7 710 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 PRR31Q5SQ13 230 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 ERICH6BQ5W0A0 696 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 MCTP2Q6DN12 878 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 ZCCHC8Q6NZY4 707 aaKnown RBP8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 PROSER1Q86XN7 944 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 CLUHP3Q96NS8 147 aa8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 MRPL42Q9Y6G3 142 aaKnown RBP8.61□□□□□ -1.03
ATP13A3-204ENST00000446356 FAM90A27PA6NNH2 459 aa8.6□□□□□ -1.03
ATP13A3-204ENST00000446356 ZNF839A8K0R7 811 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms