RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CASP1P29466 404 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 ACTR2P61160 394 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SETQ01105 290 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 ARHGAP1Q07960 439 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 TMEM266Q2M3C6 531 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 CELF3Q5SZQ8 465 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 PLA2G4FQ68DD2 849 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SWSAP1Q6NVH7 229 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 CCDC62Q6P9F0 684 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 TLK2Q86UE8 772 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 CABP7Q86V35 215 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 TPH2Q8IWU9 490 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 KCNG4Q8TDN1 519 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SCFD2Q8WU76 684 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 DHX58Q96C10 678 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 JPH1Q9HDC5 661 aaPredicted RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 GABBR1Q9UBS5 961 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SLC9A2Q9UBY0 812 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 FAM184BQ9ULE4 1060 aa8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 SRPRBQ9Y5M8 271 aaKnown RBP8.51□□□□□ -1.05
SF3A3P1-201ENST00000446317 GSTTP1A0A1W2PQM5 241 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 CUTAO60888 179 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 GH1P01241 217 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 C6orf222P0C671 652 aaPredicted RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 XRCC5P13010 732 aaKnown RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 CCL5P13501 91 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 PFKFB1P16118 471 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 MCM4P33991 863 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 TCF7P36402 384 aaPredicted RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 NDUFA8P51970 172 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 PSMC6P62333 389 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 IGBP1P78318 339 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 SPIRE1Q08AE8 756 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 RAD51AP2Q09MP3 1159 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 IRF5Q13568 498 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 ARHGEF6Q15052 776 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 XRRA1Q6P2D8 792 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 MAEAQ7L5Y9 396 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 NIPA1Q7RTP0 329 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 KCNK18Q7Z418 384 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 CCDC60Q8IWA6 550 aaPredicted RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 CKAP2LQ8IYA6 745 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 SLAIN1Q8ND83 568 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 PIGOQ8TEQ8 1089 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 DEFB118Q96PH6 123 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 NAP1L4Q99733 375 aaKnown RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 EIF2AK1Q9BQI3 630 aaKnown RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 MMTAG2Q9BU76 263 aaKnown RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 MCOLN1Q9GZU1 580 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 SCAND2PQ9GZW5 306 aaPredicted RBP8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 AP5M1Q9H0R1 490 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 XPNPEP3Q9NQH7 507 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 DISC1Q9NRI5 854 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 LMBRD1Q9NUN5 540 aa8.5□□□□□ -1.05
SF3A3P1-201ENST00000446317 SYNRGQ9UMZ2 1314 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 NPHP3-ACAD11A0A0J9YXS1 232 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 E9PMD0 336 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 POLR2DO15514 142 aaKnown RBP8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 PPP6R2O75170 966 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 AKR1A1P14550 325 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 PLCG1P19174 1290 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 ICAM3P32942 547 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 NFKBIBQ15653 356 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 CAMK4Q16566 473 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 DUSP28Q4G0W2 176 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 MOXD1Q6UVY6 613 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 SLFN12Q8IYM2 578 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 ZNF579Q8NAF0 562 aaKnown RBP8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 GPT2Q8TD30 523 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 TRAPPC12Q8WVT3 735 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 GLG1Q92896 1179 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 FAM20AQ96MK3 541 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 PNMA5Q96PV4 448 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 PPP1R16BQ96T49 567 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 PCYT2Q99447 389 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 GPR20Q99678 358 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 RNF208Q9H0X6 261 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 HMX1Q9NP08 348 aaPredicted RBP8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 DDX19AQ9NUU7 478 aaKnown RBP8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 KIAA1024Q9UPX6 916 aa8.49□□□□□ -1.05
SF3A3P1-201ENST00000446317 ELP1O95163 1332 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 RBM47A0AV96 593 aaKnown RBP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 DDX11L8A8MPP1 907 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 NR1I2O75469 434 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 STAM2O75886 525 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 IGHA2P01877 340 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 MMP3P08254 477 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 SUPT20HL2P0C7V6 817 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 RARBP10826 455 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 UBA7P41226 1012 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 AFMP43652 599 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 FXR2P51116 673 aaKnown RBP eCLIP8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 NPEPPSP55786 919 aa8.48□□□□□ -1.05
SF3A3P1-201ENST00000446317 SOX10P56693 466 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms