RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 GIPC1O14908 333 aa7.87□□□□□ -1.15
BRAFP1-201ENST00000445336 TOP3BO95985 862 aaKnown RBP7.87□□□□□ -1.15
BRAFP1-201ENST00000445336 MBTPS1Q14703 1052 aa7.87□□□□□ -1.15
BRAFP1-201ENST00000445336 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
BRAFP1-201ENST00000445336 HSPBP1Q9NZL4 362 aa7.87□□□□□ -1.15
BRAFP1-201ENST00000445336 MAN2B1O00754 1011 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 SLC28A2O43868 658 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 STAG3L1P0CL83 205 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 CCDC30Q5VVM6 783 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 DUSP27Q5VZP5 1158 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 ELMSAN1Q6PJG2 1045 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 PCSK4Q6UW60 755 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 GPR152Q8TDT2 470 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 MRPS27Q92552 414 aaKnown RBP7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 ATG4CQ96DT6 458 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 SQORQ9Y6N5 450 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 TTC3P53804 2025 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 C2CD3Q4AC94 2353 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 MYL3P08590 195 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 PPP4CP60510 307 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 SF3A2Q15428 464 aaKnown RBP7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 FAM47CQ5HY64 1035 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 GLG1Q92896 1179 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 PUF60Q9UHX1 559 aaKnown RBP7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 FBXO3Q9UK99 471 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 PPP1R9AQ9ULJ8 1098 aa7.86□□□□□ -1.15
BRAFP1-201ENST00000445336 RSPH10B2B2RC85 870 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 HRO43593 1189 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 RSPH10BP0C881 870 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 PRDX5P30044 214 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 PICALMQ13492 652 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 PLS1Q14651 629 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 SMC1AQ14683 1233 aaKnown RBP7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 HDAC7Q8WUI4 952 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 GAB3Q8WWW8 586 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 PAXBP1Q9Y5B6 917 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 MRPL42Q9Y6G3 142 aaKnown RBP7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 CACNA1IQ9P0X4 2223 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 PLXNB3Q9ULL4 1909 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 VWA5AO00534 786 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 PPM1AP35813 382 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 DZIP1Q86YF9 867 aaKnown RBP7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 CCDC144CPQ8IYA2 1237 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 SPIRE2Q8WWL2 714 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 LPIN2Q92539 896 aa7.85□□□□□ -1.15
BRAFP1-201ENST00000445336 MYH1P12882 1939 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 FAM170BA6NMN3 283 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 NARSO43776 548 aaKnown RBP7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 GH2P01242 217 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 ZNF618Q5T7W0 954 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 LRRC69Q6ZNQ3 347 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 ZNF687Q8N1G0 1237 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 TCP11L1Q9NUJ3 509 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 UCNP55089 124 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 PTPN14Q15678 1187 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 EML3Q32P44 896 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 GDF6Q6KF10 455 aaPredicted RBP7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 SLC22A17Q8WUG5 538 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 SNRNP27Q8WVK2 155 aaKnown RBP7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 DNASE1L2Q92874 299 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 DPP7Q9UHL4 492 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 IRAK3Q9Y616 596 aa7.84□□□□□ -1.15
BRAFP1-201ENST00000445336 WDR87Q6ZQQ6 2873 aa7.84□□□□□ -1.16
BRAFP1-201ENST00000445336 MYH15Q9Y2K3 1946 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 FAM196BA6NMK8 535 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 HAS3O00219 553 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 LAG3P18627 525 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 MPLP40238 635 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 HTR4Q13639 388 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 PRR12Q9ULL5 1215 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 XIRP2A4UGR9 3374 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 BLACEA4D250 179 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 C4orf47A7E2U8 309 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 CLASP2O75122 1294 aaKnown RBP7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 FLOT1O75955 427 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 HOXC8P31273 242 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 LMAN2Q12907 356 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 KARSQ15046 597 aaKnown RBP7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 ABCB5Q2M3G0 1257 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 DCAF6Q58WW2 860 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 MTSS1LQ765P7 747 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 NOL8Q76FK4 1167 aaKnown RBP7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 CEP68Q76N32 757 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 GLRX5Q86SX6 157 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 SERINC5Q86VE9 423 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 ARRDC1-AS1Q9H2J1 176 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 PHAXQ9H814 394 aaKnown RBP7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 IGF2RP11717 2491 aa7.83□□□□□ -1.16
BRAFP1-201ENST00000445336 PLIN1O60240 522 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 RHOBTB1O94844 696 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 LETM2Q2VYF4 491 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 RBM23Q86U06 439 aaKnown RBP7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 SPEM1Q8N4L4 309 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 FTHL17Q9BXU8 183 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 VCPKMTQ9H867 229 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 SEPT9Q9UHD8 586 aaPredicted RBP7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 COL4A2P08572 1712 aa7.82□□□□□ -1.16
BRAFP1-201ENST00000445336 COL6A6A6NMZ7 2263 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms