RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	COL20A1	Q9P218	1284 aa		10.77	□□□□□ -0.69
RPE-213	ENST00000445268	HCST	Q9UBK5	93 aa		10.77	□□□□□ -0.69
RPE-213	ENST00000445268	LIMD1	Q9UGP4	676 aa		10.77	□□□□□ -0.69
RPE-213	ENST00000445268	DDX41	Q9UJV9	622 aa	Known RBP	10.77	□□□□□ -0.69
RPE-213	ENST00000445268	STX8	Q9UNK0	236 aa		10.77	□□□□□ -0.69
RPE-213	ENST00000445268	C2orf16	Q68DN1	1984 aa		10.77	□□□□□ -0.69
RPE-213	ENST00000445268	ENPP3	O14638	875 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	IBSP	P21815	317 aa	Predicted RBP	10.76	□□□□□ -0.69
RPE-213	ENST00000445268	TFAP4	Q01664	338 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	APOBR	Q0VD83	1088 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	COL9A3	Q14050	684 aa	Predicted RBP	10.76	□□□□□ -0.69
RPE-213	ENST00000445268	HSDL1	Q3SXM5	330 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	NAALADL2	Q58DX5	795 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	SIX5	Q8N196	739 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	TDRD5	Q8NAT2	981 aa	Known RBP	10.76	□□□□□ -0.69
RPE-213	ENST00000445268	FEZF2	Q8TBJ5	459 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	EMID1	Q96A84	441 aa	Predicted RBP	10.76	□□□□□ -0.69
RPE-213	ENST00000445268	TAAR1	Q96RJ0	339 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	RTP3	Q9BQQ7	232 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	C16orf70	Q9BSU1	422 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.76	□□□□□ -0.69
RPE-213	ENST00000445268	CDV3	Q9UKY7	258 aa	Known RBP	10.76	□□□□□ -0.69
RPE-213	ENST00000445268	MRVI1	Q9Y6F6	885 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	CNOT1	A5YKK6	2376 aa	Known RBP	10.76	□□□□□ -0.69
RPE-213	ENST00000445268	ASPM	Q8IZT6	3477 aa		10.76	□□□□□ -0.69
RPE-213	ENST00000445268	CAND2	O75155	1236 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	CHRNA1	P02708	482 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	TDO2	P48775	406 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	LPIN1	Q14693	890 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	USH1G	Q495M9	461 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	SUMF1	Q8NBK3	374 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	TBC1D5	Q92609	795 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	CDCA3	Q99618	268 aa	Predicted RBP	10.75	□□□□□ -0.69
RPE-213	ENST00000445268	RNPEP	Q9H4A4	650 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	GPCPD1	Q9NPB8	672 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	MIA3	Q5JRA6	1907 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	SPEG	Q15772	3267 aa		10.75	□□□□□ -0.69
RPE-213	ENST00000445268	PATJ	Q8NI35	1801 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	FSCN2	O14926	492 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	SP9	P0CG40	484 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	SRGAP2B	P0DMP2	458 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	LAMC2	Q13753	1193 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	FAM26D	Q5JW98	314 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	ZC3H14	Q6PJT7	736 aa	Known RBP	10.74	□□□□□ -0.69
RPE-213	ENST00000445268	TMEM184A	Q6ZMB5	413 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	ERC1	Q8IUD2	1116 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	RHPN1	Q8TCX5	695 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	FRAT1	Q92837	279 aa	Predicted RBP	10.74	□□□□□ -0.69
RPE-213	ENST00000445268	SPATA33	Q96N06	139 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	SETD4	Q9NVD3	440 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	NCDN	Q9UBB6	729 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	FBXL21	Q9UKT6	434 aa		10.74	□□□□□ -0.69
RPE-213	ENST00000445268	HIDE1	A8MVS5	230 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268		B4DLN1	442 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	NARS	O43776	548 aa	Known RBP	10.73	□□□□□ -0.69
RPE-213	ENST00000445268	FGF18	O76093	207 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	GGPS1	O95749	300 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	LGALS2	P05162	132 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	CT47B1	P0C2W7	299 aa	Predicted RBP	10.73	□□□□□ -0.69
RPE-213	ENST00000445268	EIF2AK2	P19525	551 aa	Known RBP	10.73	□□□□□ -0.69
RPE-213	ENST00000445268	MRPL12	P52815	198 aa	Known RBP	10.73	□□□□□ -0.69
RPE-213	ENST00000445268	STXBP2	Q15833	593 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	SPECC1	Q5M775	1068 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	MYSM1	Q5VVJ2	828 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	KANK3	Q6NY19	840 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	BTNL9	Q6UXG8	535 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	RUFY4	Q6ZNE9	571 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	TRIM50	Q86XT4	487 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	TRMT2A	Q8IZ69	625 aa	Known RBP	10.73	□□□□□ -0.69
RPE-213	ENST00000445268	ZDHHC14	Q8IZN3	488 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.73	□□□□□ -0.69
RPE-213	ENST00000445268	DCAF4	Q8WV16	495 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	EHMT1	Q9H9B1	1298 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	ZNF287	Q9HBT7	754 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	IL17RB	Q9NRM6	502 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	COL4A3	Q01955	1670 aa		10.73	□□□□□ -0.69
RPE-213	ENST00000445268	FSD2	A1L4K1	749 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	POTEM	A6NI47	508 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268		H3BRB1	525 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	STK25	O00506	426 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	DCN	P07585	359 aa	Known RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	IFIT2	P09913	472 aa	Known RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	UBA1	P22314	1058 aa	Known RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	MGAT3	Q09327	533 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	PPM1J	Q5JR12	505 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	RARS2	Q5T160	578 aa	Known RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	SPOUT1	Q5T280	376 aa	Known RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	CEP85	Q6P2H3	762 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	GIMAP6	Q6P9H5	292 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	POTEG	Q6S5H5	508 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	NPAS4	Q8IUM7	802 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	C12orf76	Q8N812	135 aa	Predicted RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	LMBR1	Q8WVP7	490 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	OSBP2	Q969R2	916 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	TUT1	Q9H6E5	874 aa	Known RBP	10.72	□□□□□ -0.69
RPE-213	ENST00000445268	BCAS3	Q9H6U6	928 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	TMEM260	Q9NX78	707 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	DUSP12	Q9UNI6	340 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms