RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TMTC2Q8N394 836 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 BRF1Q92994 677 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 A1CFQ9NQ94 594 aaKnown RBP10.67□□□□□ -0.7
LINC00642-203ENST00000444942 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
LINC00642-203ENST00000444942 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.67□□□□□ -0.7
LINC00642-203ENST00000444942 FBXO40Q9UH90 709 aa10.67□□□□□ -0.7
LINC00642-203ENST00000444942 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 GOLGA8BA8MQT2 603 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 ZBTB43O43298 467 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 CYTH3O43739 400 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 PDGFBP01127 241 aaPredicted RBP10.66□□□□□ -0.7
LINC00642-203ENST00000444942 CALML3P27482 149 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 KIF5BP33176 963 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 DDIT3P35638 169 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 NEK4P51957 841 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
LINC00642-203ENST00000444942 FSCN1Q16658 493 aaKnown RBP10.66□□□□□ -0.7
LINC00642-203ENST00000444942 TKFCQ3LXA3 575 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 APOA5Q6Q788 366 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 SLC30A10Q6XR72 485 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 NOL8Q76FK4 1167 aaKnown RBP10.66□□□□□ -0.7
LINC00642-203ENST00000444942 RUFY3Q7L099 469 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 KIAA2013Q8IYS2 634 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 SRBD1Q8N5C6 995 aaKnown RBP10.66□□□□□ -0.7
LINC00642-203ENST00000444942 TBC1D5Q92609 795 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 MTA3Q9BTC8 594 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 CYP46A1Q9Y6A2 500 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 FLNBO75369 2602 aaKnown RBP10.66□□□□□ -0.7
LINC00642-203ENST00000444942 SCN10AQ9Y5Y9 1956 aa10.66□□□□□ -0.7
LINC00642-203ENST00000444942 DNAJC25-GNG10A0A024R161 153 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 H3BNC9 293 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 PPP1R11O60927 126 aaPredicted RBP10.65□□□□□ -0.7
LINC00642-203ENST00000444942 PPFIA3O75145 1194 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 CALM1P0DP23 149 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 CALM2P0DP24 149 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 CALM3P0DP25 149 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 HOXB3P14651 431 aaPredicted RBP10.65□□□□□ -0.7
LINC00642-203ENST00000444942 CCT2P78371 535 aaKnown RBP10.65□□□□□ -0.7
LINC00642-203ENST00000444942 RTN1Q16799 776 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 SGMS1Q86VZ5 419 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 FANCBQ8NB91 859 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 RETREG2Q8NC44 543 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 CLEC4DQ8WXI8 215 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 RIPOR3Q96MK2 946 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 KATNBL1Q9H079 304 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 RIOX1Q9H6W3 641 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 PDRG1Q9NUG6 133 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 CYP39A1Q9NYL5 469 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 WDR19Q8NEZ3 1342 aa10.65□□□□□ -0.7
LINC00642-203ENST00000444942 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.65□□□□□ -0.71
LINC00642-203ENST00000444942 ZBTB5O15062 677 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 ZEB2O60315 1214 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 DTNBO60941 627 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 TBX10O75333 385 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 CFBP00751 764 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 CDC27P30260 824 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 TNFAIP2Q03169 654 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 STK3Q13188 491 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 EPC2Q52LR7 807 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 RNF207Q6ZRF8 634 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 EEPD1Q7L9B9 569 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 TMEM105Q8N8V8 129 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 RRP36Q96EU6 259 aaKnown RBP10.65□□□□□ -0.71
LINC00642-203ENST00000444942 FGD4Q96M96 766 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 SAMD11Q96NU1 681 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 AMNQ9BXJ7 453 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 FOXD4L1Q9NU39 408 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 SEC63Q9UGP8 760 aaKnown RBP10.65□□□□□ -0.71
LINC00642-203ENST00000444942 CD207Q9UJ71 328 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 GNEQ9Y223 722 aaKnown RBP10.65□□□□□ -0.71
LINC00642-203ENST00000444942 PCDHA1Q9Y5I3 950 aa10.65□□□□□ -0.71
LINC00642-203ENST00000444942 ABCB11O95342 1321 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 GCN1Q92616 2671 aaKnown RBP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 MAST4O15021 2626 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 MYO10Q9HD67 2058 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 ICAM3P32942 547 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 GNAQP50148 359 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 METAP2P50579 478 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 RPS6P62753 249 aaKnown RBP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 MKRN4PQ13434 485 aaPredicted RBP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 GPM6BQ13491 265 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 TOB2Q14106 344 aaPredicted RBP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 TMTC3Q6ZXV5 915 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 ARMCX2Q7L311 632 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 TLK2Q86UE8 772 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 FAM133AQ8N9E0 248 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 MTMR8Q96EF0 704 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 GBP4Q96PP9 640 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 MAP3K14Q99558 947 aa10.64□□□□□ -0.71
LINC00642-203ENST00000444942 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
LINC00642-203ENST00000444942 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 EYA4O95677 639 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 HOXA13P31271 388 aaPredicted RBP10.63□□□□□ -0.71
LINC00642-203ENST00000444942 HYAL1Q12794 435 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 PTPN21Q16825 1174 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
LINC00642-203ENST00000444942 GPKOWQ92917 476 aaPredicted RBP eCLIP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms