RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 STX6O43752 255 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 PSAPP07602 524 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 SYT1P21579 422 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 SFNP31947 248 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 JAK3P52333 1124 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 ACTR2P61160 394 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 ITGB3BPQ13352 177 aaPredicted RBP15.92■□□□□ 0.14
SSBP3-208ENST00000444533 EARS2Q5JPH6 523 aaKnown RBP15.92■□□□□ 0.14
SSBP3-208ENST00000444533 C1orf53Q5VUE5 145 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 SLC5A5Q92911 643 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 MBOAT7Q96N66 472 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 TUT1Q9H6E5 874 aaKnown RBP15.92■□□□□ 0.14
SSBP3-208ENST00000444533 NOD1Q9Y239 953 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 FAM205CA6NFA0 338 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 SLC37A4O43826 429 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 LGALS2P05162 132 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 SUPT20HL2P0C7V6 817 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 ZNF286BP0CG31 522 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 GNAT1P11488 350 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 HOXD8P13378 290 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-208ENST00000444533 PSEN2P49810 448 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 SLC26A2P50443 739 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 RTP1P59025 263 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 PTPN11Q06124 597 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-208ENST00000444533 MFSD10Q14728 455 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 TMEM266Q2M3C6 531 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 NFRKBQ6P4R8 1299 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 RDM1Q8NG50 284 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 LENG9Q96B70 501 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 UIMC1Q96RL1 719 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 ZSCAN16Q9H4T2 348 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-208ENST00000444533 ERAP1Q9NZ08 941 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 CEP131Q9UPN4 1083 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 PCDHA10Q9Y5I2 948 aa15.91■□□□□ 0.14
SSBP3-208ENST00000444533 KIF28PB7ZC32 967 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 CHMP2AO43633 222 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 PQBP1O60828 265 aaKnown RBP15.9■□□□□ 0.14
SSBP3-208ENST00000444533 F2P00734 622 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 STAT5BP51692 787 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 PSMC6P62333 389 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 ZNF174Q15697 407 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 LRRC26Q2I0M4 334 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 KIAA0753Q2KHM9 967 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 NBPF20Q3BBV1 942 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 MIER3Q7Z3K6 550 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 CKAP2LQ8IYA6 745 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 ETNPPLQ8TBG4 499 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 RAB34Q9BZG1 259 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 PCDHA12Q9UN75 941 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 EMSYQ7Z589 1322 aa15.9■□□□□ 0.14
SSBP3-208ENST00000444533 LAD1O00515 517 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 DKC1O60832 514 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSBP3-208ENST00000444533 PSMD10O75832 226 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 BMP15O95972 392 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 TRIM60Q495X7 471 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 FERMT3Q86UX7 667 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 C7orf61Q8IZ16 206 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 TOX2Q96NM4 488 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 BCAS3Q9H6U6 928 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 KCNMB3Q9NPA1 279 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 ZNF302Q9NR11 478 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 DISC1Q9NRI5 854 aa15.89■□□□□ 0.13
SSBP3-208ENST00000444533 GSTTP1A0A1W2PQM5 241 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
SSBP3-208ENST00000444533 OR52Z1P0C646 297 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 TXKP42681 527 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 SNX17Q15036 470 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 SWSAP1Q6NVH7 229 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 PDXDC2PQ6P474 469 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 PLPPR4Q7Z2D5 763 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 ANKRD33Q7Z3H0 272 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 ATP6V0A1Q93050 837 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 C16orf70Q9BSU1 422 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
SSBP3-208ENST00000444533 TRPC6Q9Y210 931 aa15.88■□□□□ 0.13
SSBP3-208ENST00000444533 EDIL3O43854 480 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 LGR5O75473 907 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 ATG7O95352 703 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 CLTBP09497 229 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 MARK3P27448 753 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 TLE2Q04725 743 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 PPP2R5CQ13362 524 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 ABHD15Q6UXT9 468 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 CCDC155Q8N6L0 562 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 ERMNQ8TAM6 284 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 FAM167AQ96KS9 214 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 UNC45AQ9H3U1 944 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 PRDM5Q9NQX1 630 aaPredicted RBP15.87■□□□□ 0.13
SSBP3-208ENST00000444533 TMEM39AQ9NV64 488 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 STK24Q9Y6E0 443 aa15.87■□□□□ 0.13
SSBP3-208ENST00000444533 C17orf102A2RUQ5 167 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 CCNE2O96020 404 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 CDK7P50613 346 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 SESTD1Q86VW0 696 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 TRIM50Q86XT4 487 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 SLC43A3Q8NBI5 491 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 AFAP1L1Q8TED9 768 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 KAT2BQ92831 832 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 NRBP2Q9NSY0 501 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms