RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 DLGAP2Q9P1A6 1054 aa16.88■□□□□ 0.29
SYNCRIP-203ENST00000444272 DBR1Q9UK59 544 aaKnown RBP16.88■□□□□ 0.29
SYNCRIP-203ENST00000444272 PRR12Q9ULL5 1215 aa16.88■□□□□ 0.29
SYNCRIP-203ENST00000444272 CNOT1A5YKK6 2376 aaKnown RBP16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 TREHO43280 583 aa16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 NARSO43776 548 aaKnown RBP16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 ICAM1P05362 532 aa16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 CTR9Q6PD62 1173 aa16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 CASP10Q92851 521 aa16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 MKNK2Q9HBH9 465 aa16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 CA14Q9ULX7 337 aa16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 USTQ9Y2C2 406 aa16.87■□□□□ 0.29
SYNCRIP-203ENST00000444272 DENND4AQ7Z401 1863 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 HELZ2Q9BYK8 2649 aaKnown RBP16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 KIAA1217Q5T5P2 1943 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 ITPR1Q14643 2758 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 FSCN2O14926 492 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 EOMESO95936 686 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 GHRP10912 638 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 APOBRQ0VD83 1088 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 RNF207Q6ZRF8 634 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 KCTD1Q719H9 257 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 BORCS6Q96GS4 357 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 DDRGK1Q96HY6 314 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 SYNPO2Q9UMS6 1093 aa16.86■□□□□ 0.29
SYNCRIP-203ENST00000444272 TTLL1O95922 423 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 GNAI3P08754 354 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 SLC1A4P43007 532 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 PDE12Q6L8Q7 609 aaKnown RBP16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 DNERQ8NFT8 737 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 ATRIPQ8WXE1 791 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 KCNK12Q9HB15 430 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 IGSF5Q9NSI5 407 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 WNT16Q9UBV4 365 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 GMEB2Q9UKD1 530 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 SIT1Q9Y3P8 196 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 PCDHB12Q9Y5F1 795 aa16.85■□□□□ 0.29
SYNCRIP-203ENST00000444272 CYSRT1A8MQ03 144 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 HIDE1A8MVS5 230 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 FGF18O76093 207 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 MCCP23508 829 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 GATMP50440 423 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 RPS6P62753 249 aaKnown RBP16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 SPEM2Q0P670 501 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 TTF1Q15361 905 aaPredicted RBP16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 SLFNL1Q499Z3 407 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 RARS2Q5T160 578 aaKnown RBP16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 SPOUT1Q5T280 376 aaKnown RBP16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 KDF1Q8NAX2 398 aaPredicted RBP16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 EPC1Q9H2F5 836 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 TMEM260Q9NX78 707 aa16.84■□□□□ 0.29
SYNCRIP-203ENST00000444272 B4DLN1 442 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 TAF4O00268 1085 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 PLA2G6O60733 806 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 MRPL12P52815 198 aaKnown RBP16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 ZNF528Q3MIS6 628 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 KIAA1841Q6NSI8 718 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 XRRA1Q6P2D8 792 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 ZBED9Q6R2W3 1325 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 PPTC7Q8NI37 304 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 EAF2Q96CJ1 260 aaPredicted RBP16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 ACSF2Q96CM8 615 aaPredicted RBP16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 GMCL1Q96IK5 515 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 ENTPD7Q9NQZ7 604 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 PCDHGA2Q9Y5H1 932 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 HCFC2Q9Y5Z7 792 aa16.83■□□□□ 0.28
SYNCRIP-203ENST00000444272 GLULP15104 373 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 HOXC8P31273 242 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 FAM26DQ5JW98 314 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 RUFY4Q6ZNE9 571 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 THNSL1Q8IYQ7 743 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 C12orf76Q8N812 135 aaPredicted RBP16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 LINC01599Q8WXQ3 324 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 TCF25Q9BQ70 676 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 SMC4Q9NTJ3 1288 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 LAMA5O15230 3695 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 DMXL2Q8TDJ6 3036 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 PATJQ8NI35 1801 aa16.82■□□□□ 0.28
SYNCRIP-203ENST00000444272 SRRM3A6NNA2 597 aaPredicted RBP16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 SMIM10L2AP0DMW4 78 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 SMIM10L2BP0DMW5 78 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 LAMC2Q13753 1193 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 ATAT1Q5SQI0 421 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 KANK3Q6NY19 840 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 RASGRP2Q7LDG7 609 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 CLEC4DQ8WXI8 215 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 RNPEPQ9H4A4 650 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 AAASQ9NRG9 546 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 ARPP21Q9UBL0 812 aaPredicted RBP16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 DACH1Q9UI36 760 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 SLC4A4Q9Y6R1 1079 aa16.81■□□□□ 0.28
SYNCRIP-203ENST00000444272 SORBS3O60504 671 aa16.8■□□□□ 0.28
SYNCRIP-203ENST00000444272 CHRNA1P02708 482 aa16.8■□□□□ 0.28
SYNCRIP-203ENST00000444272 HOXD8P13378 290 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms