RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 NCAPH2Q6IBW4 605 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 CLEC17AQ6ZS10 378 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 MIER3Q7Z3K6 550 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.44
USP40-206ENST00000443711 RDM1Q8NG50 284 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 PPTC7Q8NI37 304 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 AFG1LQ8WV93 481 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 GPR20Q99678 358 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 LRWD1Q9UFC0 647 aa17.77■□□□□ 0.44
USP40-206ENST00000443711 FBXO2Q9UK22 296 aaPredicted RBP17.77■□□□□ 0.44
USP40-206ENST00000443711 GSTTP1A0A1W2PQM5 241 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 A6NJR5 290 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 CHMP2AO43633 222 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 CUTAO60888 179 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 ME1P48163 572 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 CPT1AP50416 773 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 NKX3-2P78367 333 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 EPHA7Q15375 998 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 MIS18BP1Q6P0N0 1132 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 IGSF22Q8N9C0 903 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 ERMNQ8TAM6 284 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 GBP4Q96PP9 640 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 DISC1Q9NRI5 854 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 SAMM50Q9Y512 469 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 STK24Q9Y6E0 443 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 WDR81Q562E7 1941 aa17.76■□□□□ 0.43
USP40-206ENST00000443711 SYNRGQ9UMZ2 1314 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 FRMPD3Q5JV73 1810 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 POTEFA5A3E0 1075 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 POTEMA6NI47 508 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 EML1O00423 815 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 PPFIA4O75335 1185 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 ATG7O95352 703 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 PGK1P00558 417 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 PSAPP07602 524 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 C6orf222P0C671 652 aaPredicted RBP17.75■□□□□ 0.43
USP40-206ENST00000443711 FSCN1Q16658 493 aaKnown RBP17.75■□□□□ 0.43
USP40-206ENST00000443711 ABHD15Q6UXT9 468 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 ARRDC4Q8NCT1 418 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 AK8Q96MA6 479 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 CLIC6Q96NY7 704 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 DEFB118Q96PH6 123 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 GDPD2Q9HCC8 539 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 PCDHA7Q9UN72 937 aa17.75■□□□□ 0.43
USP40-206ENST00000443711 MYH9P35579 1960 aaKnown RBP17.75■□□□□ 0.43
USP40-206ENST00000443711 ZEB2O60315 1214 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 KPNA6O60684 536 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 ADAMTS4O75173 837 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 GJB1P08034 283 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 MMP3P08254 477 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 SUPT20HL2P0C7V6 817 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 TCF7P36402 384 aaPredicted RBP17.74■□□□□ 0.43
USP40-206ENST00000443711 DGKDQ16760 1214 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 GNASQ5JWF2 1037 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 RNF180Q86T96 592 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 ZNF579Q8NAF0 562 aaKnown RBP17.74■□□□□ 0.43
USP40-206ENST00000443711 CSRNP2Q9H175 543 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 TELO2Q9Y4R8 837 aa17.74■□□□□ 0.43
USP40-206ENST00000443711 CTAGE5O15320 804 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 MYCNP04198 464 aaPredicted RBP17.73■□□□□ 0.43
USP40-206ENST00000443711 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
USP40-206ENST00000443711 CST5P28325 142 aaPredicted RBP17.73■□□□□ 0.43
USP40-206ENST00000443711 BEX3Q00994 111 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 GRIN1Q05586 938 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 KRT79Q5XKE5 535 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 PCSK9Q8NBP7 692 aaKnown RBP17.73■□□□□ 0.43
USP40-206ENST00000443711 KLHDC9Q8NEP7 349 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 NEK9Q8TD19 979 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 EIF2AK1Q9BQI3 630 aaKnown RBP17.73■□□□□ 0.43
USP40-206ENST00000443711 TMEM106CQ9BVX2 250 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 AZI2Q9H6S1 392 aa17.73■□□□□ 0.43
USP40-206ENST00000443711 IGKV6D-21A0A0A0MT36 114 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 BACH1O14867 736 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 LGR5O75473 907 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 SGPL1O95470 568 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 P4HBP07237 508 aaKnown RBP17.72■□□□□ 0.43
USP40-206ENST00000443711 CAPN2P17655 700 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 UBA7P41226 1012 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 IRX5P78411 483 aaPredicted RBP17.72■□□□□ 0.43
USP40-206ENST00000443711 LRRC41Q15345 812 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 AXDND1Q5T1B0 1012 aaPredicted RBP17.72■□□□□ 0.43
USP40-206ENST00000443711 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
USP40-206ENST00000443711 HAUS3Q68CZ6 603 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 ADALQ6DHV7 355 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 SWSAP1Q6NVH7 229 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 ZNF302Q9NR11 478 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 OGDHLQ9ULD0 1010 aa17.72■□□□□ 0.43
USP40-206ENST00000443711 MYADML2A6NDP7 307 aa17.71■□□□□ 0.43
USP40-206ENST00000443711 GOLGA6L4A6NEF3 574 aa17.71■□□□□ 0.43
USP40-206ENST00000443711 SLC26A4O43511 780 aa17.71■□□□□ 0.43
USP40-206ENST00000443711 DKC1O60832 514 aaKnown RBP eCLIP17.71■□□□□ 0.43
USP40-206ENST00000443711 TFRCP02786 760 aaKnown RBP17.71■□□□□ 0.43
USP40-206ENST00000443711 MYL3P08590 195 aa17.71■□□□□ 0.43
USP40-206ENST00000443711 CCT6AP40227 531 aaKnown RBP17.71■□□□□ 0.43
USP40-206ENST00000443711 STAT5BP51692 787 aa17.71■□□□□ 0.43
USP40-206ENST00000443711 PLPPR4Q7Z2D5 763 aa17.71■□□□□ 0.43
USP40-206ENST00000443711 SNX29Q8TEQ0 813 aa17.71■□□□□ 0.43
USP40-206ENST00000443711 GLG1Q92896 1179 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms