RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ZNF76P36508 570 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CCT6AP40227 531 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 STAT3P40763 770 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 EPS15P42566 896 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PRCPP42785 496 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 QARSP47897 775 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FOSBP53539 338 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 HIRAP54198 1017 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RPS6P62753 249 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CCNA1P78396 465 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CDC42EP1Q00587 391 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RASSF7Q02833 373 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 POU5F1BQ06416 359 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PDE4DQ08499 809 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 MTMR1Q13613 665 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 NEDD9Q14511 834 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PGM5Q15124 567 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PCBP1Q15365 356 aaKnown RBP eCLIP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 STXBP2Q15833 593 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ECM1Q16610 540 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TPD52L1Q16890 204 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SLC4A8Q2Y0W8 1093 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 KMT5BQ4FZB7 885 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TBC1D10BQ4KMP7 808 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ZCWPW2Q504Y3 356 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PRR16Q569H4 304 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 KIAA1755Q5JYT7 1200 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SPECC1Q5M775 1068 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FAM26FQ5R3K3 315 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 LRCH2Q5VUJ6 765 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TTI2Q6NXR4 508 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RNF207Q6ZRF8 634 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 MIGA2Q7L4E1 593 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 EPM2AIP1Q7L775 607 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 APTXQ7Z2E3 356 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FRMD5Q7Z6J6 570 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 USP37Q86T82 979 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CATSPER3Q86XQ3 398 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TMTC1Q8IUR5 882 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC170Q8IYT3 715 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 MYOCDQ8IZQ8 938 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PDILTQ8N807 584 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 MCPH1Q8NEM0 835 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF397Q8NF99 534 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 NLGN2Q8NFZ4 835 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RASSF8Q8NHQ8 419 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RASGRP4Q8TDF6 673 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SYTL5Q8TDW5 730 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 DDX12PQ92771 950 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ATP6V0A1Q93050 837 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 P2RX5Q93086 422 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 KIFC2Q96AC6 838 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FAXDC2Q96IV6 333 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PKNOX2Q96KN3 472 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 DRC1Q96MC2 740 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TRERF1Q96PN7 1200 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PNMA5Q96PV4 448 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RMDN3Q96TC7 470 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TSG101Q99816 390 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 JPH2Q9BR39 696 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PDCD2LQ9BRP1 358 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF577Q9BSK1 485 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 STRA6Q9BX79 667 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 XPO4Q9C0E2 1151 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CPVLQ9H3G5 476 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FAM124BQ9H5Z6 455 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RPAP3Q9H6T3 665 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TMEM206Q9H813 350 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PXMP2Q9NR77 195 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 KCNH7Q9NS40 1196 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TYW1Q9NV66 732 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FANCLQ9NW38 375 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TMEM260Q9NX78 707 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 GGA3Q9NZ52 723 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RNF181Q9P0P0 153 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 MYO1AQ9UBC5 1043 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 MAGEC2Q9UBF1 373 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PPP1R1BQ9UD71 204 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 AGTPBP1Q9UPW5 1226 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 USP20Q9Y2K6 914 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PCDHA2Q9Y5H9 948 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PCDHA10Q9Y5I2 948 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 BZW2Q9Y6E2 419 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SNCAIPQ9Y6H5 919 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 KIAA1217Q5T5P2 1943 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 GOLGB1Q14789 3259 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 OTOFQ9HC10 1997 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF541Q9H0D2 1346 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 WDR81Q562E7 1941 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 DNAJC25-GNG10A0A024R161 153 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 IGKV6D-21A0A0A0MT36 114 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 POTEMA6NI47 508 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MYMKA6NI61 221 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 ASB14A6NK59 587 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 FAM196BA6NMK8 535 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SPDYE16A6NNV3 312 aaPredicted RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 LGALS16A8MUM7 142 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 AKR1B15C9JRZ8 316 aaPredicted RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 N4BP3O15049 544 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CETN3O15182 167 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms