RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 DHRS4Q9BTZ2 278 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 CD244Q9BZW8 370 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 FAM221BA6H8Z2 402 aa6.95□□□□□ -1.3
VPS50-206ENST00000443443 FBXO21O94952 628 aa6.95□□□□□ -1.3
VPS50-206ENST00000443443 HSP90B1P14625 803 aaKnown RBP6.95□□□□□ -1.3
VPS50-206ENST00000443443 FAHP16930 419 aa6.95□□□□□ -1.3
VPS50-206ENST00000443443 GLRBP48167 497 aa6.95□□□□□ -1.3
VPS50-206ENST00000443443 KCTD1Q719H9 257 aa6.95□□□□□ -1.3
VPS50-206ENST00000443443 SRPK1Q96SB4 655 aaKnown RBP6.95□□□□□ -1.3
VPS50-206ENST00000443443 TELO2Q9Y4R8 837 aa6.95□□□□□ -1.3
VPS50-206ENST00000443443 IGSF3O75054 1194 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 APPP05067 770 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 ENO2P09104 434 aaPredicted RBP6.94□□□□□ -1.3
VPS50-206ENST00000443443 KRT15P19012 456 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 GABREP78334 506 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 ST5P78524 1137 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 ARHGAP36Q6ZRI8 547 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 FBXW5Q969U6 566 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 ARMC5Q96C12 935 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 DLL4Q9NR61 685 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 HSPBP1Q9NZL4 362 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 PCDHA9Q9Y5H5 950 aa6.94□□□□□ -1.3
VPS50-206ENST00000443443 C9orf118A6NHY6 69 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 PYGMP11217 842 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 PFKPQ01813 784 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 SKIDA1Q1XH10 827 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 SPATS1Q496A3 300 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 TBC1D10BQ4KMP7 808 aaPredicted RBP6.93□□□□□ -1.3
VPS50-206ENST00000443443 HABP4Q5JVS0 413 aaKnown RBP6.93□□□□□ -1.3
VPS50-206ENST00000443443 SOGA3Q5TF21 947 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 BTBD8Q5XKL5 378 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 OSTM1Q86WC4 334 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 PROSER1Q86XN7 944 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 EXOC2Q96KP1 924 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 DNAJC7Q99615 494 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 BARX1Q9HBU1 254 aaPredicted RBP6.93□□□□□ -1.3
VPS50-206ENST00000443443 RIC8BQ9NVN3 520 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 SNTG2Q9NY99 539 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 ARHGAP20Q9P2F6 1191 aa6.93□□□□□ -1.3
VPS50-206ENST00000443443 MRPS23Q9Y3D9 190 aaKnown RBP6.93□□□□□ -1.3
VPS50-206ENST00000443443 GSTA4O15217 222 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 B4GALT4O60513 344 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 PLATP00750 562 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 ITGB3P05106 788 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 NAT1P18440 290 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 DNM2P50570 870 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 SERINC3Q13530 473 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 RASA3Q14644 834 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
VPS50-206ENST00000443443 GPR19Q15760 415 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 ZNF827Q17R98 1081 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 CD276Q5ZPR3 534 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 GLB1LQ6UWU2 654 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 LRP10Q7Z4F1 713 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 ZC3H7AQ8IWR0 971 aaKnown RBP6.92□□□□□ -1.3
VPS50-206ENST00000443443 NLGN4XQ8N0W4 816 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 PCDH19Q8TAB3 1148 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 ZCCHC14Q8WYQ9 949 aaKnown RBP6.92□□□□□ -1.3
VPS50-206ENST00000443443 LOXL4Q96JB6 756 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 YTHDC1Q96MU7 727 aaKnown RBP6.92□□□□□ -1.3
VPS50-206ENST00000443443 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 NDOR1Q9UHB4 597 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 ZFP69BQ9UJL9 534 aa6.92□□□□□ -1.3
VPS50-206ENST00000443443 TCRBV5S4A2TA0A5A2 114 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 ACOT7O00154 380 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 B4GALT3O60512 393 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 CRTAMO95727 393 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 ADRB1P08588 477 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 C6orf222P0C671 652 aaPredicted RBP6.91□□□□□ -1.3
VPS50-206ENST00000443443 PDE6AP16499 860 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 EPHA5P54756 1037 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 SMAD2Q15796 467 aaKnown RBP6.91□□□□□ -1.3
VPS50-206ENST00000443443 CRY1Q16526 586 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 LONRF2Q1L5Z9 754 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 FAM47CQ5HY64 1035 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 KBTBD2Q8IY47 623 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 SH3RF2Q8TEC5 729 aa6.91□□□□□ -1.3
VPS50-206ENST00000443443 NFATC3Q12968 1075 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 SURF1Q15526 300 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 ZC3H12BQ5HYM0 836 aaKnown RBP6.9□□□□□ -1.3
VPS50-206ENST00000443443 HHIPL2Q6UWX4 724 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 DBX2Q6ZNG2 339 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 C16orf59Q7L2K0 433 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 LIMS2Q7Z4I7 341 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 PTRH1Q86Y79 214 aaKnown RBP6.9□□□□□ -1.3
VPS50-206ENST00000443443 KLHL36Q8N4N3 616 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 GPR20Q99678 358 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 SLC39A2Q9NP94 309 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 SMPD4Q9NXE4 827 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 ARHGAP28Q9P2N2 729 aa6.9□□□□□ -1.3
VPS50-206ENST00000443443 CNOT11Q9UKZ1 510 aaKnown RBP6.9□□□□□ -1.3
VPS50-206ENST00000443443 NPEPPSL1A6NEC2 478 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 PTPN1P18031 435 aaKnown RBP6.89□□□□□ -1.31
VPS50-206ENST00000443443 JAM2P57087 298 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 EFEMP1Q12805 493 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms