RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 SYT8Q8NBV8 401 aa6.52□□□□□ -1.37
AC003001.1-201ENST00000443247 SCLYQ96I15 445 aa6.52□□□□□ -1.37
AC003001.1-201ENST00000443247 SPATA25Q9BR10 227 aa6.52□□□□□ -1.37
AC003001.1-201ENST00000443247 TRIM39Q9HCM9 518 aa6.52□□□□□ -1.37
AC003001.1-201ENST00000443247 LUC7LQ9NQ29 371 aaKnown RBP6.52□□□□□ -1.37
AC003001.1-201ENST00000443247 SRPK3Q9UPE1 567 aa6.52□□□□□ -1.37
AC003001.1-201ENST00000443247 ESYT3A0FGR9 886 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 GSTA4O15217 222 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 FAHP16930 419 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 EPHA5P54756 1037 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 JAM2P57087 298 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 CRY1Q16526 586 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 OSTM1Q86WC4 334 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 PTRH1Q86Y79 214 aaKnown RBP6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 CARFQ8N187 725 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 FEZF2Q8TBJ5 459 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 TMEM260Q9NX78 707 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 WASF3Q9UPY6 502 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 COQ6Q9Y2Z9 468 aa6.51□□□□□ -1.37
AC003001.1-201ENST00000443247 TCRBV16S1A1N1A0A5B0 115 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 ZNF561-AS1K7EIQ3 104 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 MAN2B1O00754 1011 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 KCNK3O14649 394 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 KCNQ2O43526 872 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 AMY2AP04746 511 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 CKMP06732 381 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 AMY2BP19961 511 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 RPL13P26373 211 aaKnown RBP6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 KCNC1P48547 511 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 SARSP49591 514 aaKnown RBP6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 FIGNQ5HY92 759 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 EP400NLQ6ZTU2 488 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 PROSER1Q86XN7 944 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 RNPC3Q96LT9 517 aaKnown RBP6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 CLIC6Q96NY7 704 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 HSPBP1Q9NZL4 362 aa6.5□□□□□ -1.37
AC003001.1-201ENST00000443247 PPP1R12AO14974 1030 aaPredicted RBP6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 ASMTLO95671 621 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 BTBD8Q5XKL5 378 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 ZDHHC14Q8IZN3 488 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 NLGN4XQ8N0W4 816 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 XYLT2Q9H1B5 865 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 SMURF1Q9HCE7 757 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 CROTQ9UKG9 612 aa6.49□□□□□ -1.37
AC003001.1-201ENST00000443247 A0A0G2JLL6 359 aaPredicted RBP6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 OTOL1A6NHN0 477 aaPredicted RBP6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 ACOT7O00154 380 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 PTPN1P18031 435 aaKnown RBP6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 RTP5Q14D33 572 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 FNDC3BQ53EP0 1204 aaKnown RBP6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 PRR31Q5SQ13 230 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 CD276Q5ZPR3 534 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 ABHD17CQ6PCB6 329 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 IGSF22Q8N9C0 903 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 CELF4Q9BZC1 486 aaKnown RBP6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 PDGFDQ9GZP0 370 aaPredicted RBP6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 RIC8BQ9NVN3 520 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 ATP23Q9Y6H3 246 aa6.48□□□□□ -1.37
AC003001.1-201ENST00000443247 FAM90A27PA6NNH2 459 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 LACTBP83111 547 aaPredicted RBP6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 PHF19Q5T6S3 580 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 NT5DC1Q5TFE4 455 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 PRAMEF18Q5VWM3 479 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 JAZF1Q86VZ6 243 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 ZNF761Q86XN6 746 aaPredicted RBP6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 DTX3Q8N9I9 347 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 ADAMTS17Q8TE56 1095 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 RELTQ969Z4 430 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 WRNIP1Q96S55 665 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 DLL4Q9NR61 685 aa6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 MRPL42Q9Y6G3 142 aaKnown RBP6.47□□□□□ -1.37
AC003001.1-201ENST00000443247 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 DDX3XO00571 662 aaKnown RBP eCLIP6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 DNAJC8O75937 253 aaPredicted RBP6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 ZNF28P17035 718 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 KCNA6P17658 529 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 GJA4P35212 333 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 IGFALSP35858 605 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 GJA9P57773 515 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 SKIDA1Q1XH10 827 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 TMEM177Q53S58 311 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 CPZQ66K79 652 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 HHIPL2Q6UWX4 724 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 OVCH1Q7RTY7 1134 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 HOMER1Q86YM7 354 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 USP40Q9NVE5 1235 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 FANCLQ9NW38 375 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 RTEL1Q9NZ71 1219 aa6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 TNPO3Q9Y5L0 923 aaKnown RBP6.46□□□□□ -1.38
AC003001.1-201ENST00000443247 PRAMEF25A6NGN4 478 aa6.45□□□□□ -1.38
AC003001.1-201ENST00000443247 ZNF839A8K0R7 811 aa6.45□□□□□ -1.38
AC003001.1-201ENST00000443247 OPA1O60313 960 aa6.45□□□□□ -1.38
AC003001.1-201ENST00000443247 GLRBP48167 497 aa6.45□□□□□ -1.38
AC003001.1-201ENST00000443247 MLLT6P55198 1093 aaPredicted RBP6.45□□□□□ -1.38
AC003001.1-201ENST00000443247 PFKPQ01813 784 aa6.45□□□□□ -1.38
AC003001.1-201ENST00000443247 PABPC4Q13310 644 aaKnown RBP eCLIP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms