RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 FAM177BA6PVY3 158 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 LGR5O75473 907 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 MAGEA10P43363 369 aaPredicted RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 SAFBQ15424 915 aaKnown RBP eCLIP11.79□□□□□ -0.52
UBA52-202ENST00000442744 SPATA1Q5VX52 437 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 CEP135Q66GS9 1140 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 HS2ST1Q7LGA3 356 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 DDX54Q8TDD1 881 aaKnown RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 VPS37BQ9H9H4 285 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 CCDC39Q9UFE4 941 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 P4HA2O15460 535 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 ZNF280AP59817 542 aaPredicted RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 PPP2R5DQ14738 602 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 PPM1NQ8N819 430 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 EPS8L1Q8TE68 723 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 TTC12Q9H892 705 aaPredicted RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 PPARGC1AQ9UBK2 798 aaKnown RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 GPR52Q9Y2T5 361 aa11.79□□□□□ -0.52
UBA52-202ENST00000442744 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.79□□□□□ -0.52
UBA52-202ENST00000442744 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 PPEF1O14829 653 aaPredicted RBP11.78□□□□□ -0.52
UBA52-202ENST00000442744 ZBTB14O43829 449 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 ZNF189O75820 626 aaPredicted RBP11.78□□□□□ -0.52
UBA52-202ENST00000442744 NLRP6P59044 892 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 GALEQ14376 348 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 BBS9Q3SYG4 887 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 SLC6A19Q695T7 634 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 SLC9B2Q86UD5 537 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 FAM9CQ8IZT9 166 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 PDCL2Q8N4E4 241 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 ARL8AQ96BM9 186 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 UQCC2Q9BRT2 126 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 PLVAPQ9BX97 442 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 SIRT5Q9NXA8 310 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 LOC102724428A0A0B4J2F2 783 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 KCNJ13O60928 360 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 LARGE1O95461 756 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 BAG2O95816 211 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 SIK1P57059 783 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 HOOK3Q86VS8 718 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 VPS45Q9NRW7 570 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 XRN1Q8IZH2 1706 aaKnown RBP11.78□□□□□ -0.52
UBA52-202ENST00000442744 USP6P35125 1406 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 C17orf113A0A1B0GUU1 675 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 EYA2O00167 538 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 KRT1P04264 644 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 ATP5DP30049 168 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 ATP5OP48047 213 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 ITKQ08881 620 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 CNSTQ6PJW8 725 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 EPHX4Q8IUS5 362 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 C7orf57Q8NEG2 295 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 C1orf216Q8TAB5 229 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 ALKBH8Q96BT7 664 aaKnown RBP11.78□□□□□ -0.52
UBA52-202ENST00000442744 LTV1Q96GA3 475 aaPredicted RBP11.78□□□□□ -0.52
UBA52-202ENST00000442744 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
UBA52-202ENST00000442744 TSGA10Q9BZW7 698 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 GPR108Q9NPR9 543 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 ADAMTS1Q9UHI8 967 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 TRAF3IP3Q9Y228 551 aa11.78□□□□□ -0.52
UBA52-202ENST00000442744 SNUPNO95149 360 aaKnown RBP11.77□□□□□ -0.53
UBA52-202ENST00000442744 PHKA1P46020 1223 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 IFIT5Q13325 482 aaKnown RBP11.77□□□□□ -0.53
UBA52-202ENST00000442744 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.53
UBA52-202ENST00000442744 GRM3Q14832 879 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 EMC10Q5UCC4 262 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 LIN54Q6MZP7 749 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 ESX1Q8N693 406 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 INTS4Q96HW7 963 aaKnown RBP11.77□□□□□ -0.53
UBA52-202ENST00000442744 MKNK1Q9BUB5 465 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 TNKS2Q9H2K2 1166 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 GGT7Q9UJ14 662 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 FAM208AQ9UK61 1670 aaKnown RBP11.77□□□□□ -0.53
UBA52-202ENST00000442744 NR2C2P49116 596 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 AK2P54819 239 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 ICA1Q05084 483 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 SART3Q15020 963 aaKnown RBP11.77□□□□□ -0.53
UBA52-202ENST00000442744 ITPRIPL1Q6GPH6 555 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 USHBP1Q8N6Y0 703 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 STRN4Q9NRL3 753 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 NKIRAS2Q9NYR9 191 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 OGFRQ9NZT2 677 aa11.77□□□□□ -0.53
UBA52-202ENST00000442744 PLSCR1O15162 318 aa11.76□□□□□ -0.53
UBA52-202ENST00000442744 RTN2O75298 545 aa11.76□□□□□ -0.53
UBA52-202ENST00000442744 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
UBA52-202ENST00000442744 ANXA1P04083 346 aa11.76□□□□□ -0.53
UBA52-202ENST00000442744 CCDC30Q5VVM6 783 aa11.76□□□□□ -0.53
UBA52-202ENST00000442744 CWC27Q6UX04 472 aaKnown RBP11.76□□□□□ -0.53
UBA52-202ENST00000442744 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
UBA52-202ENST00000442744 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
UBA52-202ENST00000442744 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.76□□□□□ -0.537e-6■■■□□ 16.9
UBA52-202ENST00000442744 TNIP3Q96KP6 325 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms