RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GLG1Q92896 1179 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 BCAS3Q9H6U6 928 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 ERAP1Q9NZ08 941 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 PKD2L1Q9P0L9 805 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 MTUS1Q9ULD2 1270 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 PCDHA6Q9UN73 950 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 INSL6Q9Y581 213 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 PCDHA8Q9Y5H6 950 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 CNTNAP5Q8WYK1 1306 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 EPOPA6NHQ4 379 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 GOLGA8AA7E2F4 631 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 MAFGO15525 162 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 HMGB1P09429 215 aaKnown RBP13.48□□□□□ -0.25
TTC28-203ENST00000442232 KCNA2P16389 499 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 ADCY7P51828 1080 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 PPFIA1Q13136 1202 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 GRB10Q13322 594 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 MBTPS1Q14703 1052 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 PLEKHG4Q58EX7 1191 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 TAF2Q6P1X5 1199 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
TTC28-203ENST00000442232 GDPD5Q8WTR4 605 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 SEPT1Q8WYJ6 367 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
TTC28-203ENST00000442232 UHRF1Q96T88 793 aaPredicted RBP13.48□□□□□ -0.25
TTC28-203ENST00000442232 SDF4Q9BRK5 362 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 AZI2Q9H6S1 392 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 COG5Q9UP83 839 aa13.48□□□□□ -0.25
TTC28-203ENST00000442232 TCF20Q9UGU0 1960 aaKnown RBP13.47□□□□□ -0.25
TTC28-203ENST00000442232 NLRC5Q86WI3 1866 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 ARHGEF15O94989 841 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 FOSP01100 380 aaPredicted RBP13.47□□□□□ -0.25
TTC28-203ENST00000442232 MARK3P27448 753 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 TCTN1Q2MV58 587 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 WWC2Q6AWC2 1192 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 YME1L1Q96TA2 773 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 IFIH1Q9BYX4 1025 aaKnown RBP13.47□□□□□ -0.25
TTC28-203ENST00000442232 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 JPH1Q9HDC5 661 aaPredicted RBP13.47□□□□□ -0.25
TTC28-203ENST00000442232 JADE2Q9NQC1 790 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 UBIAD1Q9Y5Z9 338 aa13.47□□□□□ -0.25
TTC28-203ENST00000442232 SPTBN5Q9NRC6 3674 aaKnown RBP13.46□□□□□ -0.25
TTC28-203ENST00000442232 KLF18A0A0U1RQI7 1052 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 CCDC196A0A1B0GTZ2 297 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 RPLP2P05387 115 aaKnown RBP13.46□□□□□ -0.25
TTC28-203ENST00000442232 ITGB5P18084 799 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 ZNF76P36508 570 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 RCAN1P53805 252 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 ERVK-21P61565 698 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 GRIK4Q16099 956 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
TTC28-203ENST00000442232 FBXO22Q8NEZ5 403 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 HLA-CQ95604 372 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 SAMD11Q96NU1 681 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 RIC8AQ9NPQ8 531 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 LMCD1Q9NZU5 365 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 SLC9A2Q9UBY0 812 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 TUBE1Q9UJT0 475 aa13.46□□□□□ -0.25
TTC28-203ENST00000442232 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.26
TTC28-203ENST00000442232 VCANP13611 3396 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 RRN3P2A6NIE6 340 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 ATP9AO75110 1047 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 METAP2P50579 478 aaKnown RBP eCLIP13.45□□□□□ -0.26
TTC28-203ENST00000442232 IGBP1P78318 339 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 EXOSC10Q01780 885 aaKnown RBP13.45□□□□□ -0.26
TTC28-203ENST00000442232 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 COL9A3Q14050 684 aaPredicted RBP13.45□□□□□ -0.26
TTC28-203ENST00000442232 TSGA10IPQ3SY00 556 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 KRT40Q6A162 431 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 MXRA8Q9BRK3 442 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 ANO3Q9BYT9 981 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 NCOR1O75376 2440 aa13.45□□□□□ -0.26
TTC28-203ENST00000442232 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 SMCO2A6NFE2 343 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 M0QZ92 97 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 UPP2O95045 317 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 ADAM17P78536 824 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 HTRA4P83105 476 aaPredicted RBP13.44□□□□□ -0.26
TTC28-203ENST00000442232 TFF2Q03403 129 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 PTPROQ16827 1216 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 FAM26DQ5JW98 314 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 SKAP1Q86WV1 359 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 CCDC12Q8WUD4 166 aaPredicted RBP13.44□□□□□ -0.26
TTC28-203ENST00000442232 BARHL2Q9NY43 387 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 TELO2Q9Y4R8 837 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 V9GY48 417 aaPredicted RBP13.44□□□□□ -0.26
TTC28-203ENST00000442232 COL4A6Q14031 1691 aa13.44□□□□□ -0.26
TTC28-203ENST00000442232 NFASCO94856 1347 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 STXBP3O00186 592 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 LPXNO60711 386 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms