RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 MYOCDQ8IZQ8 938 aa14.46□□□□□ -0.09
SLC48A1-201ENST00000442218 NOX5Q96PH1 765 aa14.46□□□□□ -0.09
SLC48A1-201ENST00000442218 KCNK3O14649 394 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 CLIC2O15247 247 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 NOL4O94818 638 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 PSMC6P62333 389 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 PABPC4Q13310 644 aaKnown RBP eCLIP14.46□□□□□ -0.12e-6■■□□□ 12
SLC48A1-201ENST00000442218 USH1GQ495M9 461 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 TTC31Q49AM3 519 aaPredicted RBP14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 FAM26FQ5R3K3 315 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 HGSNATQ68CP4 663 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 CRAMP1Q96RY5 1269 aa14.46□□□□□ -0.1
SLC48A1-201ENST00000442218 ATP2C2O75185 946 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 KCNA1Q09470 495 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 NNTQ13423 1086 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 SFMBT2Q5VUG0 894 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 GPBP1Q86WP2 473 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 ADGRF4Q8IZF3 695 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 HAS1Q92839 578 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 AK8Q96MA6 479 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 MTMR9Q96QG7 549 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 ANO9A1A5B4 782 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 HSF2BPO75031 334 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 PRPHP41219 470 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 KLHL30Q0D2K2 578 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 C16orf86Q6ZW13 317 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 RETREG2Q8NC44 543 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 CHORDC1Q9UHD1 332 aaPredicted RBP14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 PCDHA12Q9UN75 941 aa14.45□□□□□ -0.1
SLC48A1-201ENST00000442218 GPR75-ASB3A0A0A6YYF3 556 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 TARSL2A2RTX5 802 aaKnown RBP14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 PPEF1O14829 653 aaPredicted RBP14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 ATP2B4P23634 1241 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 RBM5P52756 815 aaKnown RBP eCLIP14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 DAGLBQ8NCG7 672 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 TSG101Q99816 390 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 SPZ1Q9BXG8 430 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 COL4A3BPQ9Y5P4 624 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 RSPH10B2B2RC85 870 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 RSPH10BP0C881 870 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 TBC1D10BQ4KMP7 808 aaPredicted RBP14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 NEDD1Q8NHV4 660 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 CASKIN2Q8WXE0 1202 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 TSGA10Q9BZW7 698 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 USP40Q9NVE5 1235 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 FAM169AQ9Y6X4 670 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 NDUFAB1O14561 156 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 RAD51CO43502 376 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 CEP104O60308 925 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 IKQ13123 557 aaPredicted RBP14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 ADAM9Q13443 819 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 IQCEQ6IPM2 695 aa14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 RNPC3Q96LT9 517 aaKnown RBP14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 DDX47Q9H0S4 455 aaKnown RBP14.44□□□□□ -0.1
SLC48A1-201ENST00000442218 LAD1O00515 517 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 GDF11O95390 407 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 MCM3P25205 808 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 PLS1Q14651 629 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 SLC9C1Q4G0N8 1177 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 SPICE1Q8N0Z3 855 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 FLAD1Q8NFF5 587 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 KAT2BQ92831 832 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 CAMKK2Q96RR4 588 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 VIPAS39Q9H9C1 493 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 JMJD4Q9H9V9 463 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 LRRC4CQ9HCJ2 640 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 PPANQ9NQ55 473 aaKnown RBP14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 ZNF233A6NK53 670 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 CORO7P57737 925 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 UBXN2AP68543 259 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 CFAP58Q5T655 872 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 GUF1Q8N442 669 aaKnown RBP14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 MMGT1Q8N4V1 131 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 DNAJC19Q96DA6 116 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 MTMR4Q9NYA4 1195 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 KIAA1551Q9HCM1 1747 aa14.43□□□□□ -0.1
SLC48A1-201ENST00000442218 EBAG9O00559 213 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 TCP1P17987 556 aaKnown RBP14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 PPP4CP60510 307 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 PTK2Q05397 1052 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 PRPF4BQ13523 1007 aaKnown RBP14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 CFAP221Q4G0U5 840 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 PRR16Q569H4 304 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 CEP85LQ5SZL2 805 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 C15orf52Q6ZUT6 534 aaKnown RBP14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 CCDC84Q86UT8 332 aaPredicted RBP14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 CYP2W1Q8TAV3 490 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 SPAG5Q96R06 1193 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 SEPT11Q9NVA2 429 aaKnown RBP14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 AJAP1Q9UKB5 411 aaPredicted RBP14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 ZBTB39O15060 712 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 ITGA4P13612 1032 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 NR2F2P24468 414 aa14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 HOXA13P31271 388 aaPredicted RBP14.42□□□□□ -0.1
SLC48A1-201ENST00000442218 MAGEA9P43362 315 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms