RNA–Protein interactions for RNA: ENST00000442019.6

CAGE1-204, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-204ENST00000442019 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 TMEM60Q9H2L4 133 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 NOD2Q9HC29 1040 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 HOMER3Q9NSC5 361 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 INTUQ9ULD6 942 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 BAZ2AQ9UIF9 1905 aaKnown RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 hCG_1642624A0A1W2PR95 340 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 ZSCAN5CA6NGD5 496 aaPredicted RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 BUB1O43683 1085 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 PPFIA2O75334 1257 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 NUDT17P0C025 328 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 GBP2P32456 591 aaPredicted RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 NPEPPSP55786 919 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 EHHADHQ08426 723 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 HLTFQ14527 1009 aaKnown RBP eCLIP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 QPCTQ16769 361 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 SV2BQ7L1I2 683 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 TMC3Q7Z5M5 1100 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 CPLX4Q7Z7G2 160 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 DGKHQ86XP1 1220 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 APLFQ8IW19 511 aaPredicted RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 LMBR1Q8WVP7 490 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 SCLT1Q96NL6 688 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 PSMB7Q99436 277 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 TXLNGYQ9BZA5 131 aa7.85□□□□□ -1.15
CAGE1-204ENST00000442019 NSRP1Q9H0G5 558 aaKnown RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 ARPP21Q9UBL0 812 aaPredicted RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 TRMT112Q9UI30 125 aaKnown RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 TNRC6CQ9HCJ0 1690 aaKnown RBP7.85□□□□□ -1.15
CAGE1-204ENST00000442019 F8VZ95 297 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 SART1O43290 800 aaKnown RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ZBTB48P10074 688 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 YY1P25490 414 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 KLRC1P26715 233 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 GBP1P32455 592 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ZNF131P52739 623 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ZNF268Q14587 947 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 PIGWQ7Z7B1 504 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ZC3H3Q8IXZ2 948 aaKnown RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 SYCE1Q8N0S2 351 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 CCDC63Q8NA47 563 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 MIGA1Q8NAN2 632 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 LRRC15Q8TF66 581 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 PGM2Q96G03 612 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ZNF317Q96PQ6 595 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 BARHL2Q9NY43 387 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 FBXL5Q9UKA1 691 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 COL4A3BPQ9Y5P4 624 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 EP400Q96L91 3159 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 PP2D1A8MPX8 630 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 MYCNP04198 464 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 FCER1AP12319 257 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 MRPS25P82663 173 aaKnown RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 KCNMA1Q12791 1236 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ASIC2Q16515 512 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 TXNRD1Q16881 649 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ZCWPW2Q504Y3 356 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ODF2Q5BJF6 829 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 FAM83BQ5T0W9 1011 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 SLFN11Q7Z7L1 901 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 SEPT12Q8IYM1 358 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ZNF34Q8IZ26 560 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 GBP7Q8N8V2 638 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 SDR42E1Q8WUS8 393 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 PLCD4Q9BRC7 762 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 TMEM109Q9BVC6 243 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 RAB17Q9H0T7 212 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 STMN4Q9H169 189 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 ATP8A2Q9NTI2 1148 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 SUCLA2Q9P2R7 463 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 C15orf41Q9Y2V0 281 aa7.84□□□□□ -1.15
CAGE1-204ENST00000442019 COL5A2P05997 1499 aaPredicted RBP7.84□□□□□ -1.15
CAGE1-204ENST00000442019 F8W031 263 aaPredicted RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 BUB1BO60566 1050 aaPredicted RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 TLR2O60603 784 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 WFS1O76024 890 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 GFPT2O94808 682 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 NOL4O94818 638 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 FTCDO95954 541 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 FXR2P51116 673 aaKnown RBP eCLIP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 CCNG1P51959 295 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 FKBP3Q00688 224 aaKnown RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 MKRN4PQ13434 485 aaPredicted RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 FAM196AQ6ZSG2 479 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 LRRC57Q8N9N7 239 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 TMOD3Q9NYL9 352 aa7.84□□□□□ -1.16
CAGE1-204ENST00000442019 NOP53Q9NZM5 478 aaKnown RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 CNOT8Q9UFF9 292 aaKnown RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.84□□□□□ -1.16
CAGE1-204ENST00000442019 MYH7BA7E2Y1 1941 aa7.83□□□□□ -1.16
CAGE1-204ENST00000442019 ROBO3Q96MS0 1386 aa7.83□□□□□ -1.16
CAGE1-204ENST00000442019 ITGB4P16144 1822 aa7.83□□□□□ -1.16
CAGE1-204ENST00000442019 hCG_1984214I3L0E3 225 aa7.83□□□□□ -1.16
CAGE1-204ENST00000442019 STXBP3O00186 592 aa7.83□□□□□ -1.16
CAGE1-204ENST00000442019 LUC7L3O95232 432 aaKnown RBP7.83□□□□□ -1.16
CAGE1-204ENST00000442019 SMARCA1P28370 1054 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms