RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 WDR64B1ANS9 1081 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 ZSCAN12O43309 604 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 OFD1O75665 1012 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 POTEIP0CG38 1075 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 TAL1P17542 331 aaPredicted RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 CYP11B2P19099 503 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 RPL13P26373 211 aaKnown RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 PPP2R3AQ06190 1150 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 ALCAMQ13740 583 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 KRT31Q15323 416 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 CCDC40Q4G0X9 1142 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 MUM1L1Q5H9M0 696 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 POTEGQ6S5H5 508 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 POTEEQ6S8J3 1075 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 OTOP1Q7RTM1 612 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 CACTINQ8WUQ7 758 aaKnown RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 OTUD5Q96G74 571 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 NUDT12Q9BQG2 462 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 AGO4Q9HCK5 861 aaKnown RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 TAB2Q9NYJ8 693 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 NRBP1Q9UHY1 535 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 KCNG1Q9UIX4 513 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 ADAMTS5Q9UNA0 930 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 UBE4BO95155 1302 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 MYH7BA7E2Y1 1941 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 SPDYE16A6NNV3 312 aaPredicted RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 NR3C2P08235 984 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 CYP4A11Q02928 519 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 NR1I3Q14994 352 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 PGM5Q15124 567 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 HSP90AA4PQ58FG1 418 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 TTI2Q6NXR4 508 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 ANKRD35Q8N283 1001 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 DNERQ8NFT8 737 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 SLC10A4Q96EP9 437 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 TAF1DQ9H5J8 278 aaPredicted RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 ZNHIT6Q9NWK9 470 aaKnown RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 ODF2LQ9ULJ1 636 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 A0A1W2PQC6 194 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 TESPA1A2RU30 521 aaPredicted RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 LGALS16A8MUM7 142 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 POTEB2H3BUK9 544 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 CETN3O15182 167 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 ARHGAP6O43182 974 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 ARP10275 920 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 FKBP1BP68106 108 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 FKBP3Q00688 224 aaKnown RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 UBXN1Q04323 297 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 STK4Q13043 487 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 SNAPC2Q13487 334 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 HSP90AA2PQ14568 343 aaPredicted RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 CCDC144BQ3MJ40 725 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 CENPPQ6IPU0 288 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 SLC30A10Q6XR72 485 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 OTUD6AQ7L8S5 288 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 RIOX2Q8IUF8 465 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 RETREG2Q8NC44 543 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 ZNF397Q8NF99 534 aaPredicted RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 GOLGA5Q8TBA6 731 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 ATP6V0A1Q93050 837 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 CNOT6LQ96LI5 555 aaKnown RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 P2RX7Q99572 595 aaKnown RBP6.68□□□□□ -1.34
VPS50-205ENST00000441602 BHMT2Q9H2M3 363 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 UNC45AQ9H3U1 944 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 KCNH7Q9NS40 1196 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 SPTLC3Q9NUV7 552 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 AGTPBP1Q9UPW5 1226 aa6.68□□□□□ -1.34
VPS50-205ENST00000441602 A0A0G2JLL6 359 aaPredicted RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 TRAF5O00463 557 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 QARSP47897 775 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 SLC12A3P55017 1021 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 CCNA1P78396 465 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 CTTNQ14247 550 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 STXBP2Q15833 593 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 ZNF746Q6NUN9 644 aaPredicted RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 KCNK18Q7Z418 384 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 PRRT2Q7Z6L0 340 aaPredicted RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 REPS2Q8NFH8 660 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 DNAJC19Q96DA6 116 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 NAP1L5Q96NT1 182 aaPredicted RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 UIMC1Q96RL1 719 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 NOC4LQ9BVI4 516 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 VPS16Q9H269 839 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 HSD3B7Q9H2F3 369 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 KCNH4Q9UQ05 1017 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 SSC5DA1L4H1 1573 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 LRRC10BA6NIK2 292 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 DDX39AO00148 427 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 LYPLA2O95372 231 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 PSAPP07602 524 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 SPATA31C1P0DKV0 1188 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 FCER1AP12319 257 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 PSMC5P62195 406 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 MAN2A1Q16706 1144 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 EDRF1Q3B7T1 1238 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 LBX2Q6XYB7 198 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 HS2ST1Q7LGA3 356 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 SMAP1Q8IYB5 467 aaPredicted RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 GJA10Q969M2 543 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms