RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TFAP4Q01664 338 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 ZNF844Q08AG5 666 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 PSMD2Q13200 908 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 TMC4Q7Z404 712 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 UBLCP1Q8WVY7 318 aaPredicted RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 MAGOHBQ96A72 148 aaKnown RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 HOMER3Q9NSC5 361 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 HSPA9P38646 679 aaKnown RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 RBM5P52756 815 aaKnown RBP eCLIP18.4■□□□□ 0.54
PMS1-213ENST00000441310 PKN1Q16512 942 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 DDX42Q86XP3 938 aaKnown RBP eCLIP18.4■□□□□ 0.54
PMS1-213ENST00000441310 CCDC197Q8NCU1 140 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 PLCB1Q9NQ66 1216 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 ARHGAP20Q9P2F6 1191 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 USP17L3A6NCW0 530 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 USP17L4A6NCW7 530 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 RAD51CO43502 376 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 EEF1GP26641 437 aaKnown RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 MAGEA1P43355 309 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 TRAF1Q13077 416 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 CRELD2Q6UXH1 353 aaPredicted RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 USP17L1Q7RTZ2 530 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 C1orf131Q8NDD1 294 aaKnown RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 PRCCQ92733 491 aaPredicted RBP18.4■□□□□ 0.54
PMS1-213ENST00000441310 MTMR8Q96EF0 704 aa18.4■□□□□ 0.54
PMS1-213ENST00000441310 RASSF7Q02833 373 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 GNPTABQ3T906 1256 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 MAEAQ7L5Y9 396 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 SRBD1Q8N5C6 995 aaKnown RBP18.39■□□□□ 0.53
PMS1-213ENST00000441310 P3H4Q92791 437 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 MKNK2Q9HBH9 465 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 ATP8A2Q9NTI2 1148 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 PACSIN2Q9UNF0 486 aaPredicted RBP18.39■□□□□ 0.53
PMS1-213ENST00000441310 FTCDO95954 541 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 UAP1Q16222 522 aaPredicted RBP18.39■□□□□ 0.53
PMS1-213ENST00000441310 KLHDC7AQ5VTJ3 777 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 SCN7AQ01118 1682 aa18.39■□□□□ 0.53
PMS1-213ENST00000441310 TNRC6CQ9HCJ0 1690 aaKnown RBP18.39■□□□□ 0.53
PMS1-213ENST00000441310 MTIF2P46199 727 aaKnown RBP18.38■□□□□ 0.53
PMS1-213ENST00000441310 PTGDRQ13258 359 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 SPTY2D1Q68D10 685 aaPredicted RBP18.38■□□□□ 0.53
PMS1-213ENST00000441310 PDXDC2PQ6P474 469 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 ZNF804AQ7Z570 1209 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 SPICE1Q8N0Z3 855 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 WDR66Q8TBY9 1149 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 FERMT2Q96AC1 680 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 L3MBTL3Q96JM7 780 aaPredicted RBP18.38■□□□□ 0.53
PMS1-213ENST00000441310 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 CORO1CQ9ULV4 474 aaPredicted RBP18.38■□□□□ 0.53
PMS1-213ENST00000441310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
PMS1-213ENST00000441310 CASZ1Q86V15 1759 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 LINGO3P0C6S8 592 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 TAX1BP1Q86VP1 789 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 GGT7Q9UJ14 662 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 ADAMTS3O15072 1205 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 ORC4O43929 436 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 CTNND1O60716 968 aaKnown RBP18.38■□□□□ 0.53
PMS1-213ENST00000441310 ARMC9Q7Z3E5 817 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 ITFG2Q969R8 447 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 RMND1Q9NWS8 449 aa18.38■□□□□ 0.53
PMS1-213ENST00000441310 IRS2Q9Y4H2 1338 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 KCNJ2P63252 427 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 FUT2Q10981 343 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 RUFY4Q6ZNE9 571 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 CSGALNACT2Q8N6G5 542 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 CHMP6Q96FZ7 201 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 FAM207AQ9NSI2 230 aaPredicted RBP18.37■□□□□ 0.53
PMS1-213ENST00000441310 POLLQ9UGP5 575 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 STX8Q9UNK0 236 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 NKRFO15226 690 aaKnown RBP eCLIP18.37■□□□□ 0.53
PMS1-213ENST00000441310 KRT71Q3SY84 523 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 SLC30A9Q6PML9 568 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 KRT27Q7Z3Y8 459 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 PROM2Q8N271 834 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 BORCS6Q96GS4 357 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 RNF26Q9BY78 433 aaPredicted RBP18.37■□□□□ 0.53
PMS1-213ENST00000441310 CPVLQ9H3G5 476 aa18.37■□□□□ 0.53
PMS1-213ENST00000441310 H0YGN5 161 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 RGL2O15211 777 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 LRIG3Q6UXM1 1119 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 ANKS4BQ8N8V4 417 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 CCHCR1Q8TD31 782 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 NOX5Q96PH1 765 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 SLC5A4Q9NY91 659 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 NFS1Q9Y697 457 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 ONECUT3O60422 494 aaPredicted RBP18.36■□□□□ 0.53
PMS1-213ENST00000441310 ERVK-9P63128 1117 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 BIRC3Q13489 604 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 MFSD14BQ5SR56 506 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 STAG2Q8N3U4 1231 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 KCNV2Q8TDN2 545 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 NOC4LQ9BVI4 516 aaKnown RBP18.36■□□□□ 0.53
PMS1-213ENST00000441310 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
PMS1-213ENST00000441310 LRRC4CQ9HCJ2 640 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 ARPP21Q9UBL0 812 aaPredicted RBP18.36■□□□□ 0.53
PMS1-213ENST00000441310 A8MUI8 341 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms